Amycolatopsis sp. YIM 10: YIM_36710
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Entry
YIM_36710 CDS
T06270
Symbol
oppD10
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_36710 (oppD10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_36710 (oppD10)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
YIM_36710 (oppD10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
TniB
AAA_16
Mg_chelatase
nSTAND1
AAA_29
AAA_7
DUF87
Motif
Other DBs
NCBI-ProteinID:
QFU92501
UniProt:
A0A5P9PW48
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All DBs
Position
complement(7739359..7740345)
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AA seq
328 aa
AA seq
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MNEPLLSIEDLRAHIGTARGTVRAVDGVSLSVGHGEALGVVGESGSGKSIMVRALLGLLP
ARSGVSGSVRFAGRDLLSLSKRERLDVLGKQIAMVFQDPGRALNPVVRIERQLTESMRRH
LGVSAAEARERALGLLREVGVSDPERRLRNYPHELSGGMRQRVMIAIALACEPRLLIADE
PTTALDVTIQRQILDLIRRIQQERTMAMMLISHDLAVVAGRTDRVAVLYAGRLAEVGSTK
AVFGSPRHRYTEALLAATPSLETERHARLRIIDGSLPDPVAPPPGCRFAPRCGFADAGCR
TEAPPPARAGDDHVSTCRHPVDAGLVHD
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagccgttgctgtccattgaggatctccgtgcccatatcggcacggcccgcgga
acggtgcgggcggtcgacggcgtgagcttgtccgtcggccacggtgaggcgctcggtgtc
gtcggcgagtcgggttcgggaaagtcgatcatggttcgcgcgttgctggggctgctgccc
gcccggtccggggtcagcgggtcggtccggttcgccggccgggacctgctctcgctgagc
aaacgggaacggctcgacgtgctcggcaagcagatcgcgatggtgttccaggatcccggc
cgcgcgctgaacccggtcgtccggatcgagcgtcagctcaccgaatcgatgcggcggcac
ctgggcgtctccgccgcggaggcccgggagcgggcactcggcctgctgcgggaggtgggg
gtttcggatccggaacggcggctgcggaactacccgcacgagctgtccggcgggatgcgc
cagcgcgtcatgatcgccatcgcgctggcctgcgaaccgcggctgctgatcgccgacgag
ccgaccaccgcgctggacgtgacgatccagcggcagatcctcgacctgatccggcgcatc
cagcaggaacggaccatggccatgatgctgatcagccacgacctcgccgtcgtcgccggc
cgcacggaccgcgtcgcggtcctgtacgccgggcggctggcggaggtgggcagcaccaag
gcggtgttcggctcaccccggcaccgctacacggaggcgctcctggcggcgactccgtcg
ctggagaccgaacggcacgcgagattgcggatcatcgacgggtcactgccggacccggtg
gcgccgccgcccgggtgccggttcgcgccgcgctgcgggttcgcggacgccggctgccgc
actgaggcgccgccgcccgcgcgcgccggggacgatcacgtgagcacgtgccggcacccg
gtcgacgccggactcgtccatgactag
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