Amycolatopsis sp. YIM 10: YIM_46365
Help
Entry
YIM_46365 CDS
T06270
Symbol
ykoD
Name
(GenBank) Putative HMP/thiamine import ATP-binding protein YkoD
KO
K01552
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_46365 (ykoD)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
YIM_46365 (ykoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_16
AAA_23
AAA_25
nSTAND1
RsgA_GTPase
FtsK_SpoIIIE
AAA_30
AAA_15
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QFU94399
UniProt:
A0A5P9Q112
LinkDB
All DBs
Position
complement(9919743..9921341)
Genome browser
AA seq
532 aa
AA seq
DB search
MIEFSRVSITYAEATTPVLSEVDLLVEEGELCLVAGRTGSGKSTFLGAINGLVPHFTGGH
LRGSVRVAGKDTSQHPPREFAELVGVVGQDPLAGFVTDTVEEELAYGMEQLAVPPEVMRK
RVEETLDLLGIAELRNRPLRTLSGGQQQRVAIGSVLTAHPKVLVLDEPTSALDPTAAEEV
LAAITRLVHDLGTTVVVAEHRMERVAQYADRLLYVPGDGSIRSGTPAEILADADIAPPLV
ELGRLAGWSPLPLSVRDARRRAGPLRERLIGRTPVVSERSDGPVKLAAEKIVVRYGELVA
VREVSLDLRGGQIVALMGRNGSGKSSLLWALQGSGPRSGGKVDVGGQDPKSLKPHRARKL
VGLVPQTPGDLLYLDSVDTECAQADLESEAEPGSCRAMLDRLTPGIDGGKHPRDLSEGQR
LALVLAIQLTAAPEVMLLDEPTRGLDYHAKRHFSAVLAELAANGAAIVLATHDVEFVATA
ADRVVVMAEGDVVADGPTADVVVASPAFAPQVAKVLAPAEWLTVDQVAKALA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgagttctcgcgggtgagcatcacctacgccgaagccaccacgccggtgctgtcc
gaggtggacctcctggtcgaagaaggtgagctgtgcctggtcgccgggcggaccggctcg
ggcaagtcgacctttctcggcgcgatcaacggcctggtgccgcacttcaccggcgggcac
ctgcgcggcagcgtgcgcgtcgcgggcaaggacacctcgcagcacccgccgcgcgagttc
gccgagctggtcggagtggtcgggcaggacccgctggccgggttcgtcaccgacaccgtc
gaggaggagctggcctacggcatggagcaacttgccgtgccgcccgaggtgatgcgcaaa
cgggtcgaggagacgctggacctgctgggcatcgcggagctgcgcaaccgtccacttcgg
acactgtccggcgggcagcagcagcgggtggcgatcggctcggtgctcaccgcgcacccg
aaggtgctggtgctggacgagccgacctcggcgctggacccgaccgcggccgaagaggtg
ctggccgcgatcacccgcctggtgcacgacctcggcaccaccgtggtggtcgccgagcac
cgcatggaacgcgtcgcgcagtacgccgaccgcctgctctacgtgcccggtgacggctcg
atccggtccggcaccccggccgagatcctggccgacgccgacatcgcgccgccgctggtc
gagctgggcaggctggccgggtggtcaccgctaccgctgtcggtgcgggacgcccgtcgc
cgggccgggccgctgcgggagcggctgatcggccggacgccggtggtgtccgaacgctcc
gacggtcccgtgaagctcgcggccgagaagatcgtggtgcgctacggcgaactggtcgcc
gtgcgcgaggtcagcctcgacctgcgcggcgggcagatcgtggcgctgatgggccgcaac
ggttccggcaagtcgtccctgctgtgggcgttgcagggcagcggtccgcgcagcggcggc
aaggtggacgtcggcgggcaggacccgaagtcgctcaagccgcaccgcgccaggaagctg
gtcggcctggtcccgcagacccccggcgacctgctctacctcgactccgtggacaccgag
tgcgcgcaggccgatctcgagtcggaggccgagccgggcagttgccgcgcgatgctcgac
cggctcacccccggcatcgacggcggcaagcacccgcgcgacctgtccgaggggcagcgg
ctggcgctggtgctggcgatccagctgaccgccgcgcccgaggtgatgctgctcgacgag
cccacccgcggcctggactaccacgcgaaacggcacttcagcgcggtgctggcggagctg
gccgcgaacggcgcggccatcgtgctcgccacgcacgacgtggagttcgtcgcgaccgcg
gccgaccgcgtggtggtgatggccgaaggtgacgtggtcgccgacggcccgaccgcggac
gtggtggtcgcctcgcccgccttcgcgccgcaggtggcgaaggtgctggcaccggcggaa
tggctcaccgtggaccaggtggcgaaggcgctggcatga
DBGET
integrated database retrieval system
