Amycolatopsis mediterranei RB: B737_2941
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Entry
B737_2941 CDS
T02804
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
amz
Amycolatopsis mediterranei RB
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amz03009
]
B737_2941
Enzymes [BR:
amz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
B737_2941
Ribosome biogenesis [BR:
amz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B737_2941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AGT83605
LinkDB
All DBs
Position
3185721..3186650
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AA seq
309 aa
AA seq
DB search
MSSRMLPVPDGLDGMRVDAGLAKLLGLSRTVVAELAESGDVLLDGRPAGKSDRLSGGGLL
EITLPEPANPVEVVAQPVDGMQILHDDDDIVVISKPVGVAVHPSPGWTGPTVVGGLAAAG
LRIATSGAAERQGVVHRLDAGTTGVMVVAKSEHAYTVLKRAFKERTVDKGYHAIVQGHPD
PMRGTIDAPIDRHPRHDYKFAVVQGGRPSVTHYEVVEAFRAASLTHIKLETGRTHQIRVH
FSALRHPCVGDLTYGADPVLARHLGLSRQWLHAKTLAFAHPADGRWVEFESEYPDDLAKA
LEILRDESY
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcgcggatgctcccggtgcccgacgggctcgacgggatgcgcgtcgacgccggc
ctcgccaagctgctcgggctgtcccgcacggtcgtcgccgagctcgccgaatccggggac
gtgctgctcgacggccgtcccgcgggcaagtccgaccgcctctccggcggcggcctgctg
gagatcaccctgccggagccggcgaacccggtcgaggtcgtcgcccagccggtcgacggc
atgcagatcctgcacgacgacgacgacatcgtggtgatctcgaagccggtcggcgtcgcg
gtgcacccgagcccgggctggaccggcccgaccgtcgtcggcggcctcgccgcggccggc
ctgcgcatcgcgacctcgggtgcggccgagcgccagggcgtggtccaccggctcgacgcg
ggcaccaccggcgtgatggtggtggccaagagcgagcacgcgtacaccgtgctgaagcgc
gcgttcaaggagcgcacggtcgacaagggctaccacgcgatcgtccagggccacccggac
ccgatgcgcggcacgatcgacgcccccatcgaccgccacccgcgccacgactacaagttc
gcggtggtccagggcggccgcccgagcgtgacgcactacgaagtcgtcgaggcgttccgg
gcggcgtcgctcacgcacatcaagctcgaaaccgggcggacgcaccagatccgcgtccac
ttctcggcgctgcggcacccctgcgtcggcgacctgacctacggcgccgacccggtgctg
gcccgccacctcgggctcagccggcagtggctgcacgcgaagaccctggcgttcgcgcac
ccggcggacggccgctgggtcgagttcgagtcggagtacccggacgacctggcgaaggcc
ctggagatcctgcgcgacgaaagctactag
DBGET
integrated database retrieval system
