Anoxybacillus sp. PDR2: GRQ40_13570
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Entry
GRQ40_13570 CDS
T06397
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
and
Anoxybacillus sp. PDR2
Pathway
and03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
and00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GRQ40_13570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
and03400
]
GRQ40_13570
Enzymes [BR:
and01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GRQ40_13570
DNA repair and recombination proteins [BR:
and03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GRQ40_13570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
UvrD-helicase
AAA_22
AAA_16
AAA_12
UvrD_C
AAA_28
AAA_18
AAA
NTPase_1
Zeta_toxin
T2SSE
DUF4926
TolA
TsaE
nSTAND3
KTI12
Motif
Other DBs
NCBI-ProteinID:
QHC04874
LinkDB
All DBs
Position
complement(2807458..2809815)
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AA seq
785 aa
AA seq
DB search
MQRQESWALGEKSFIKGTHIVTIFHNESNLYSVVRIHVEETNEGYDEQEVVVTGYFPRMN
EHDVYVFYGAFKDHPRFGRQYVAEYFRKEMPQTKEGLIYYLSSDLFKGIGKKTAEQIVEA
LGDQAISVILADPEALAKVPKLPKNKAKELYETLKEHQGLEQIMIALSQFGFGPQLSMKI
YQVYKEAALDVIQKNPYQLVEDVEGIGFRRADELGQQLGLSGSHPDRVRAACLYVIESDC
LQEGHVYVTKEQLLFKAKQLLESKRGEDIPPDMIERELLDLAKEGKVIHEDGRFYIPTLY
FAEKGIITNIKRLLEQKVTGFPEAEFLLALGRLEERLDVQYGPLQKDAIQQAISSPLFIL
TGGPGTGKTTVIKGIVEIFADLHGVSLDPKDYHKENPFPILLAAPTGRAAKRMSEATGLP
AMTIHRLLGYNAAEGFTHHEDEPIEGNLLIVDEMSMVDTWLANQLLKSLPTGMQVILVGD
EDQLPSVGPGQVLKDLLKTSRIPTIRLTEVYRQAEGSSIIELAHCMKKGELPADLSSPKT
DRSFIRCKAEQVVDVVRQIADNAWKKGYSVKDIQVLAPMYRGPAGIDRLNRTLQELFNPK
SPQKRELSSGETVYRVGDKVLQLVNQPDQNVFNGDIGEIVAIFYAKENTEQQDLVVVSFD
GNEVTYTRQDLTQITHAYCCSIHKAQGSEFPIVILPVVKSYYRMLQRNLLYTAVTRSKKF
LILCGEEEAFRIGTARCDDGVRQTTLAEKIQQLFEPVDEMELPLDDAGIGMENVSPYDFM
IEEAK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcggcaagaatcatgggcgttaggggaaaaatcgtttattaaagggacgcatatc
gtcactatttttcataacgaaagcaacctttattccgtggtccgcattcacgttgaagaa
acgaatgaagggtatgacgagcaagaggttgttgtaactggatatttcccgcgtatgaac
gaacatgatgtttatgtgttttacggcgcttttaaagatcaccccagatttggacggcaa
tatgtagccgagtattttcgaaaagaaatgccgcaaacaaaggaagggttgatctattat
ttatcgagcgatttgtttaaggggatcggaaagaaaacagcggaacaaattgtggaagcg
ctcggggaccaagcgatttcagtgatactagcagatccggaagcgctcgcgaaagtgcct
aagcttccgaaaaacaaagcgaaagagctatacgaaacgttaaaggagcaccaaggcctt
gaacaaattatgattgctctttctcagttcggctttggtccgcagctgtcaatgaaaatt
taccaagtatataaagaagctgcacttgatgtcattcaaaaaaatccgtatcagcttgtc
gaggatgtagaagggattgggtttcggcgagccgatgagttaggccagcagctcggcctt
tccggcagccatccagatcgtgtccgagccgcctgtttatatgtcatcgaaagcgattgt
ttgcaagagggacatgtatatgtgacaaaagaacagttgctttttaaagctaagcagctg
cttgaatcgaaaagaggagaggacattcctcctgacatgattgagcgtgaactgcttgat
ctagccaaagagggaaaagtcattcatgaagatggccgcttttatattccgactctttac
tttgcggaaaaaggaatcatcaccaatataaagcgcctgcttgaacaaaaggtaacagga
tttccagaagcggaatttttgctggcgctcggccggttggaggagcggttggatgtacaa
tatggcccgttgcaaaaggacgcgattcaacaagcgatttcttcccctctgtttattttg
acaggcgggccgggaacgggaaaaacaacggtgataaaagggattgtggagatttttgcc
gacctccacggcgtttcgcttgacccgaaggattatcataaagaaaatccttttccgatt
ttgcttgctgcgccaacagggagagccgcaaaacgaatgagcgaagcgacaggattacca
gcgatgacgatccatcgtttacttggttataatgctgcagaaggatttactcatcatgaa
gatgaaccgattgaaggaaatttgctcattgtcgatgaaatgtccatggtagacacatgg
ctagctaaccaattgctgaagtctcttccaactggtatgcaagtcattttggtcggtgat
gaggatcaattgccgtcagtcggaccggggcaagtattaaaggatttgttaaaaacgtcg
cgaattcctactattcgcttgaccgaagtatatcgtcaagcagaaggatcctccatcatt
gaattggcccattgtatgaaaaaaggggagcttcctgctgatctaagctctccgaaaaca
gaccgttcctttattcgctgtaaagctgaacaagtggttgatgtcgtgaggcaaattgct
gataatgcgtggaaaaaagggtattcggtaaaagatattcaagtgctcgccccaatgtat
cgcggtcctgccggcatcgatcgtctcaatcgaacgcttcaagagctgtttaatccgaaa
tcgccacaaaagcgcgagctgtccagcggcgaaacggtttatcgcgttggcgataaggtg
ttgcagcttgtcaatcaacccgatcaaaatgtgtttaatggcgatattggtgaaattgtc
gccatcttttacgcgaaagagaatacggaacagcaggacttggttgtcgtatcctttgat
ggaaacgaagtcacttatacgagacaggatttaacacaaattacccacgcttattgctgt
tcgattcataaggcacagggcagtgaatttccgattgtgattttgccggtggtgaaaagc
tattatcgaatgctacagcggaatttgttatatacagcagtgacaagaagcaaaaaattt
ttaattttatgcggtgaggaggaagcgtttcgcattggaacggcacgctgtgatgacggg
gtgaggcaaacgacattagctgaaaaaattcaacagctgtttgagcctgttgatgaaatg
gagttgccgttggatgatgcggggatcgggatggaaaacgtttcaccgtatgactttatg
atagaagaagcaaaataa
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