Aminobacter niigataensis: AMD1_1874
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Entry
AMD1_1874 CDS
T09606
Symbol
tetA
Name
(GenBank) Tetracycline resistance protein, class C
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anj02000
]
AMD1_1874 (tetA)
01504 Antimicrobial resistance genes [BR:
anj01504
]
AMD1_1874 (tetA)
Transporters [BR:
anj02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
AMD1_1874 (tetA)
Antimicrobial resistance genes [BR:
anj01504
]
Gene variants
Tetracycline resistance genes
Transporters
AMD1_1874 (tetA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
TRI12
Folate_carrier
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
CAI2933148
LinkDB
All DBs
Position
AMD1:complement(1778047..1779291)
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AA seq
414 aa
AA seq
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MSITGSRRQAAIAFIFVTAVLDIVAMGIIIPVLPSLIEEFAGSNADAGWINGVFIALWAF
MQFVCSPIIGSLSDRYGRRPVILLSTVGLAADYVLMALAPNLWWLALGRIVAGITSSSFT
TVFAYMADITPPEGRARAYGLIGAAFSAGFVAGPLMGGFLGEISPRAPFWVAAAMSGLAF
LYGAFVLPESLPREKRMAFSWRRANPFGAMMLLRSHPELTGLAAVTFLLHFAHHVFSALF
VLYAAYRYGWHAWEVGLLLAMVGVLDMIVQGLIVGPVVKRFGDRTTMVFGLFAGAFGIAC
MGWAPTGFWFTLAIIPNALWGLAMPTTQSLMTQRVSEFEQGQLQGANMSVASIAGVASPL
FFGAVYAWTLSEDTPMPYPGLAFYLAAVVLLSAALLGWAVARKADRADTAEETV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcacaggttcgcgtcgccaggcggcgatcgccttcatcttcgtcaccgccgtg
ctcgacatcgtggcgatgggcatcatcatcccggtgctgccctcgctgattgaggagttc
gccggctccaacgccgacgccggctggatcaatggcgtcttcatcgcgctctgggccttc
atgcagttcgtctgctcgccgatcatcggctcgctgtcggatcgttacggccgccgcccc
gtcatcctgctgtcgaccgtcggcctcgccgccgactacgtgctgatggcgctggcgccg
aacctgtggtggctggcgcttggccgcatcgtcgccggcatcacctcgtcgagcttcacc
accgtcttcgcctacatggcagacatcaccccgcccgagggccgcgcccgcgcctatggc
ctgatcggtgctgccttcagcgcaggtttcgttgccgggccgctgatgggcggtttcctc
ggcgagatctcgccgcgcgcgccgttctgggtggcggcggcgatgagcgggcttgccttc
ctctatggcgccttcgtcctgcctgaatcgctgccgcgcgaaaagcgcatggccttttcc
tggcgccgcgccaatccgttcggcgcgatgatgctgctgcgttcgcacccggaactgacc
ggactcgccgcggtgaccttcctgctgcatttcgcccatcacgtcttctcggcgctgttc
gtgctctatgccgcctaccgctacggctggcatgcctgggaagtgggcctgctgctggcg
atggtcggcgtgctcgacatgatcgtgcaggggctgatcgtcggcccggtcgtcaagcgc
ttcggcgaccgcacgacgatggtgttcggcctgtttgccggcgccttcggcatcgcctgc
atgggctgggcgccgaccggcttctggttcacgctggcgatcatccccaacgccttgtgg
ggcctcgctatgccgaccacgcagtcgctgatgacccagcgtgtttccgagttcgagcag
ggccagctgcagggcgccaacatgagcgtggccagcattgccggcgtcgcctcgccgctg
ttcttcggcgcggtctatgcctggacgctgagcgaagatacgccgatgccctaccccggc
ctcgccttctacctcgccgcagtcgtgctgctgtcggcggcattgctcggctgggcggtc
gcccgcaaggccgaccgcgccgacacggcggaagagacggtctga
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