Anaeromyxobacter sp. K: AnaeK_1023
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Entry
AnaeK_1023 CDS
T00748
Name
(GenBank) DNA polymerase LigD, polymerase domain protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ank
Anaeromyxobacter sp. K
Pathway
ank03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ank00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AnaeK_1023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ank03400
]
AnaeK_1023
Enzymes [BR:
ank01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AnaeK_1023
DNA repair and recombination proteins [BR:
ank03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AnaeK_1023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
ACG72258
UniProt:
B4UFZ0
LinkDB
All DBs
Position
complement(1155962..1156903)
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AA seq
313 aa
AA seq
DB search
MARAQQGVEVEVEGRRILLRNLDKVFYPEAGFTKGEVVDYYRRVAPVLLPHLRDRPLTLK
RYPEGVDGPHFYEKRCPRHRPDWFRTEAIWSEGNQDYIDYCVVDDLSSLVWLASIADLEL
HPSLSLVDDVERPTALVFDLDPGPPADLLACCEVALLLRRLLAALGLEAFPKGSGSKGMQ
LYVPLSGATYADTKPFAHAVARLLERRHPQLVVERMAKALRGGKVLVDWSQNDPHKTTVC
VYSLRARPRPTVSTPLRWAEVEKAVRTRDAGGLVFEAAAVLRRVERVGDLFAPVLTLRQR
LPAPAELERAAGA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgcgcgcagcagggcgtcgaggtcgaggtggaggggcggcggatcctcctccgc
aacctcgacaaggtgttctaccccgaggccggcttcaccaagggtgaggtggtggactac
taccgccgcgtcgcccccgtgctcctgccgcacctgcgggaccggccgctcacgctgaag
cgctacccggagggcgtggacgggccgcacttctacgagaagcgctgtccgcgccaccgc
ccggactggttccggaccgaggcgatctggagcgagggcaaccaggactacatcgactac
tgcgtggtggacgacctgtcctcgctggtgtggctcgccagcatcgccgacctggagctc
cacccctcgctgtcgctggtggacgacgtggagcggcccaccgcgctcgtgttcgacctc
gacccgggcccgcccgccgatctgctcgcctgctgcgaggtggcgctgctgctgcggcgg
ctgctcgccgcgctcggcctggaggcgttcccgaagggctccgggtcgaagggcatgcag
ctgtacgtgccgctctccggcgccacctacgcggacacgaagccgttcgcgcacgccgtc
gcccgcctgctggagcgccgccacccgcagctcgtggtcgagcgcatggcgaaggcgctc
cgcggcggcaaggtgctggtggactggagccagaacgatccgcacaagaccaccgtctgc
gtctactcgctgcgggcgcggccgcgccccaccgtctccaccccgctccgctgggccgag
gtggagaaggccgtccggacccgcgacgcgggcgggctggtgttcgaggcggcggcggtg
ctccggcgggtcgagcgcgtgggcgacctgttcgccccggtgctgacgctgcgccagcgc
ctgcccgccccggcggagctcgagcgggcggccggcgcgtga
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integrated database retrieval system
