Amygdalobacter nucleatus: PYS63_00035
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Entry
PYS63_00035 CDS
T09414
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
anq
Amygdalobacter nucleatus
Pathway
anq00470
D-Amino acid metabolism
anq00550
Peptidoglycan biosynthesis
anq01100
Metabolic pathways
anq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
anq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PYS63_00035
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PYS63_00035
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PYS63_00035
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
anq01011
]
PYS63_00035
Enzymes [BR:
anq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PYS63_00035
Peptidoglycan biosynthesis and degradation proteins [BR:
anq01011
]
Precursor biosynthesis
Amino acid ligase
PYS63_00035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_4
Ins134_P3_kin
Motif
Other DBs
NCBI-ProteinID:
WEG36871
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All DBs
Position
complement(8660..9856)
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AA seq
398 aa
AA seq
DB search
MDKQRQEFDFKGECLAYGYNSAFSLDMIKGKHILLLFGGRSTEHMVACRSAQFIAQALAK
LPIKLSLVGITEAGEFLPYPFNGELDSASWEKIARNELAKRKIEPSLVTSPRAFLTALSQ
DASPIDLVFPVLHGVNCEDGAIQGLLRLANVPFVGSDILASACGMDKVTCKELLEVKGLP
VVPWLAYERQRLQYDMEEVVKELEQAIKYPVFVKPSNAGSSVGASRVNNREELLLALAEA
SRFDRLVLVEKCKRVRELECAVLGNSPYYLTGPVGEIIVKTDNAVYDYQTKYFSNQASEA
CIPSPLAPELARQIQDYAIDICKYLQVSGLSRVDFFLDKDDNKLYVNEINTFPGFTSISL
FPKVFAKAGIKAEELCVRLLCLALEDYANKQREEQIKA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggataaacaacgacaggaatttgattttaagggtgagtgtttggcctatggctataat
tcagctttttctttggatatgatcaaaggcaaacatattttgcttttatttggtggtcgt
tccaccgagcatatggttgcttgtcgttcggctcagttcatagcccaagcactagccaaa
ttgcctatcaaattgtcactggttggcatcactgaagctggcgagtttttaccctatcct
tttaatggtgaattagacagtgcaagctgggagaaaatagctagaaatgagctagctaaa
cgcaaaatagaacctagccttgtgacgagcccacgtgcctttttgacagctttaagccaa
gatgcgagcccgattgatcttgttttccctgttttgcatggcgttaattgcgaagatggc
gcaatccaaggtttattgcgcttagccaatgtaccattcgttggctctgatatattggct
tctgcctgtggcatggataaagtgacgtgcaaggagcttttggaggttaaagggcttcca
gttgtgccatggcttgcctatgaaaggcaaagattgcaatatgatatggaagaggttgtg
aaagagcttgaacaagctatcaaatatccagtctttgtgaagccatctaatgccggatca
tcagttggggcaagccgagttaataatcgcgaggaattacttttggccttagctgaggca
agccgctttgaccgcttggtacttgtggaaaagtgcaagcgggtgagagaacttgaatgt
gcagttttaggcaatagcccttattacctgacaggaccagttggcgaaattatcgtcaaa
accgacaatgctgtttatgattatcagacgaagtattttagcaatcaggcatcggaagct
tgcataccttcaccattagccccagaattggctcgccaaattcaagattatgcaattgat
atttgtaagtatttgcaagtgagtggcttatcgagagtcgatttcttcttagataaagat
gataacaagttgtatgtgaatgaaataaatactttccctggctttacatcaattagcctt
ttcccgaaagtttttgccaaagctggtattaaagcagaggagctttgtgtacgcttgctt
tgtctagctttggaggattatgctaataagcaacgagaggagcaaattaaggcatga
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