Arvicanthis niloticus (African grass rat): 117699066
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Entry
117699066 CDS
T08817
Symbol
Tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04260
Cardiac muscle contraction
anu04261
Adrenergic signaling in cardiomyocytes
anu04814
Motor proteins
anu04820
Cytoskeleton in muscle cells
anu05206
MicroRNAs in cancer
anu05410
Hypertrophic cardiomyopathy
anu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117699066 (Tpm1)
04820 Cytoskeleton in muscle cells
117699066 (Tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117699066 (Tpm1)
04261 Adrenergic signaling in cardiomyocytes
117699066 (Tpm1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
117699066 (Tpm1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117699066 (Tpm1)
05414 Dilated cardiomyopathy
117699066 (Tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117699066 (Tpm1)
04147 Exosome [BR:
anu04147
]
117699066 (Tpm1)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
117699066 (Tpm1)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of microglial cells
117699066 (Tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
ERM_helical
TMF_DNA_bd
Laminin_I
DUF3450
ATG16
ADIP
CENP-F_leu_zip
DUF745
Lebercilin
DUF4200
DUF1664
XhlA
DUF16
EzrA
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
117699066
NCBI-ProteinID:
XP_034346663
EnsemblRapid:
ENSANLG00005025847
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAE
ERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAE
FAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLELNNM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgctgaagctcgacaaagagaacgccttggat
cgagcagagcaggcggaggccgacaagaaggccgcggaagaccggagcaagcagctggaa
gatgagctggtgtcactgcaaaagaaactcaagggcactgaagatgaactggacaaatac
tctgaggctctcaaagatgcccaggagaaactggagctggcggagaaaaaggccacagat
gctgaagctgacgtagcttctctgaacagacgcatccagctggttgaggaggagttggat
cgggctcaggagcgtctggccacagctctgcagaagctggaggaggctgagaaggctgca
gatgagagcgagagaggcatgaaagtcattgaaagccgagcccaaaaagatgaagaaaag
atggagattcaggagatccagctgaaagaggccaagcacattgctgaagatgctgaccgg
aagtatgaagaggtcgcccgtaaactggtgatcatcgagagcgatctggaacgtgcagag
gagcgggccgagctctcggaaggcaaatgtgccgagcttgaagaagaattgaaaacggtg
acgaacaacttgaagtcactggaggctcaggctgagaagtactcccagaaggaagacaag
tacgaagaggagatcaaggttctctctgacaagctgaaggaggctgagactcgggctgag
tttgcagagagatcagtaaccaaattggagaaaagcattgacgacttagaagagaaagtg
gctcatgccaaagaagaaaaccttagtatgcaccagatgctggaccagactttactggag
ctaaacaacatgtga
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integrated database retrieval system
