Arvicanthis niloticus (African grass rat): 117699099
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Entry
117699099 CDS
T08817
Symbol
Vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04140
Autophagy - animal
anu04148
Efferocytosis
anu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117699099 (Vps11)
04148 Efferocytosis
117699099 (Vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117699099 (Vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117699099 (Vps11)
Membrane trafficking [BR:
anu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117699099 (Vps11)
Hops complex
117699099 (Vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
TPR_11
zf-RING_11
DLP_helical
zf-HC5HC2H
zf-C3HC4_3
zf-ANAPC11
zf-RING-like
DUF5847
Motif
Other DBs
NCBI-GeneID:
117699099
NCBI-ProteinID:
XP_034346738
EnsemblRapid:
ENSANLG00005025700
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFEKELVKEPLGNDGTAPGAAAVSGPTASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDDCVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTS
RDSQNSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKILMHHIPEQTTQLLKGLCTDYRPSLEGRGDREAPSCRANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQAKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQILHYHMQHEQYRQVIAVCERHGEQEPSLW
EQALSYFARKEEDCKEYVAAVLRHIENKSLMPPLLVVQTLAHNSTATLSIIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTARLTPSLEAGLQRDLLMHSRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctacagtggcggcgattcgttttcttcgagaaggagctggtgaaggag
ccgctgggtaatgatgggaccgctcccggggccgccgctgtctcgggacccactgcttcc
aagttcctttgcctccctcctggcatcactgtctgcgactcaggccgcgggagcctggtc
tttggagatatggaaggccagatctggttcttgccacgttctctacagcttacagggttc
caggcctacaaactacgggtgacacacttatatcagctaaagcagcacaatattctggcg
tcggttggtgaggatgaagagggtattaaccctctggtaaagatctggaacctggaaaag
agagatggtggcaatccactctgcactcggattttccctgccatcccagggacagagcca
actgttgtgtcttgtttgacggtccatgagaatctcaactttatggctattggtttcaca
gatggcagtgttactctgaacaagggagatattacccgggaccggcatagcaagactcag
attttgcacaagggcaactatcctgttactggactggcctttcgccaagcaggaaagacc
actcacttatttgtcgtgacaactgaaaacgttcagtcctatatagtctccggaaaggac
taccctcgtgtggagttggacacccatggttgtggcctgcgatgttcagccctgagtgac
ccttctcaggacctgcagttcattgttgctggagatgactgtgtctacctttaccagcca
gatgaacgtgggccctgctttgccttcgagggccacaagctcatcgcccactggtttaga
ggctaccttgtcattgtctcccgtgaccggaaggtttctcccaagtcagagtttaccagc
agggactcacagaactctgacaagcaaattctcaacatctatgacctgtgcaacaagttc
atagcctacagcgctgtttttgaggatgtagtggatgtgctcgctgagtggggctccctg
tacgtgctgacgcgggatgggcgggtccacgcattgcaggagaaggacacacagaccaag
ctggagatgctatttaagaagaatctatttgagatggcaattaacctggctaagagtcaa
catctggacagtgatgggctggctcaaatcttcatgcagtatggagaccatctgtacagc
aagggcaaccatgacggggctgttcagcagtatatccgaaccattgggaagttggagcca
tcctacgtgatccgtaagtttctggatgcccagcgcatccacaacttgactgcctaccta
cagacgctgcaccggcagtctctggctaacgctgatcacaccaccctgcttctgaactgc
tacaccaaactcaaggacagctccaagttggaagaattcatcaagacaaagagtgagagt
gaagttcactttgatgtggagacagccatcaaggtcctccggcaggcgggctactactcc
catgccctctatctggctgagaatcacgcacatcatgagtggtacttgaagatccagcta
gaggacattaagaactatcaggaagccctgcggtacatcggtaagctgcctttcgagcag
gcagagagtaacatgaagcgttatggcaagatcctcatgcaccacataccggagcagaca
acccagttgctgaaaggcctctgtactgactaccggcccagtctggaaggccgaggcgac
cgagaggctccaagctgccgggccaactctgaggagttcatccccatctttgcaaataac
ccaagagaactgaaggccttcctggagcacatgagtgaagtgcagccagactcaccacag
ggcatctatgacacgctcttggagcttcgactgcagaactgggcccatgagaaggatcca
caggccaaggagaaacttcatgcagaggccatctccctgctcaagagtggccgattctgt
gatgtgtttgacaaggcattggtcctgtgccagatgcatgacttccaggatggggtcctt
tacctctacgagcaggggaagctgttccagcagatcttgcattaccacatgcagcacgag
cagtaccgccaggtgatcgccgtgtgtgagcgccatggggagcaggagccctccctgtgg
gagcaggccctcagctacttcgcccgcaaggaggaagactgcaaggagtatgtggcagcg
gtgcttcgacacatcgagaacaagagcctaatgccgcctcttctagtggtacagaccctg
gcccacaactccacagctaccctgtccatcatccgagattacctggtccagaaactgcag
aaacagagccagcagattgcacaggatgagcttcgggtgcggcggtacagagaggagacc
actcgcatccgccaggaaatccaagagctcaaggcgagtccaaagattttccagaagacg
aagtgcagcatctgtaacagtgccctggagctgccttcagtccacttcctgtgtggccac
tccttccaccaacactgctttgagagttactcagaaagtgatgctgactgccccacctgc
ctccctgagaatcggaaggtcatggacatgatccgggcccaggaacagaaacgagatctc
catgatcagttccagcatcagctcaagtgctcgaatgacagcttctccgtgattgcggac
tactttggccgaggggttttcaacaagttgactctgctgactgaccctcctacagccaga
ctgacccccagcctggaggctggactgcagcgggacctgctgatgcactccaggagggga
acttaa
DBGET
integrated database retrieval system
