Arvicanthis niloticus (African grass rat): 117706844
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Entry
117706844 CDS
T08817
Symbol
Pogz
Name
(RefSeq) pogo transposable element with ZNF domain isoform X1
KO
K22594
pogo transposable element with ZNF domain
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117706844 (Pogz)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117706844 (Pogz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_1
HTH_Tnp_Tc5
zf-C2H2_4
HTH_28
HTH_23
Motif
Other DBs
NCBI-GeneID:
117706844
NCBI-ProteinID:
XP_034355823
EnsemblRapid:
ENSANLG00005005783
LinkDB
All DBs
Position
4:74323450..74364636
Genome browser
AA seq
1407 aa
AA seq
DB search
MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTTPVSVSQQPAPVPIAAHASVA
GPLSTSTAVSSSGAQNSDSTKKTLVTLIANNNAGNTLVQQGGQPLILTQNPAPGLGTMVT
QPVLRPVQVMQNANHVTSSPVASQPIFITTQGFPVRNVRPVQNAMNQVGIVLNVQQGQTV
RPITLVPAPGTQFVKPTVGVPQVFSQMTPVRPGSTMPVRPTTNTFTTVIPATLTIRSTVP
QSQSQQTKSTPSTSTTPTATQPTSLGQLAGQPPGQSNQTSNPKLAPSFPSPPAVSIASFV
TVKRPGVTGENSNEVAKLVNTLNTIPSLGQSPGPVVMSNNSSAHRTSGPESSMKVTSSIP
VFDLQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVEYQKKGKSLDAEPSAPSAAKPSS
PEKTAPVTSTPSSTPIPALSPPTKVPEPNENAGDTVQTKLIMLVDDFYYGRDGGKAAQLT
SFPKVATSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDGHTICQHCYRQFSTPFQL
QCHLENVHSPYESTTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEV
DVHFRMIHEDTRHLLCPYCLKVFKNGNAFQQHYMRHQKRNVYHCNKCRLQFLFAKDKIEH
KLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTVPVSSNDTPSGALQEAAPLTSTDPLP
VFLYPPVQRNIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAY
ANHMINNHVPRKSPKYLALFKNSVSGIKLACTSCTFATSVGDAMAKHLVFNPSHRSSNIL
PRGLSWMSHSRPGQTPERVFDRSMKNTYLPPPLLPNKTATVKPVGATPAEPQELAGPMLQ
ALPSPASTATPPATPTHPLPSALPPLATEGTECLNVNEQEEGSPVTQEPEPASGGGGGSG
VGKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIRRWLRRFQASQGENLEGKYLSFE
AEEKLAEWVLIQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVRFMLRHHLTPHAR
RAVAHTLPKHVAENAGLFIEFVQRQIHNQDLPLSMIVAIDEISLFLDTEVLSSDDRKENA
LQTVGTGEPWCDVVLAILADGTVLPTLVFFRGQANRLANVPDSILLEAKDSGYSDDEIME
VWSTRVWKKHTACQHSKSMLVMDCHRTHLSEEVLALLSASSTLPAVVPAGCSSKIQPLDV
CIKRTVKNFLHKKWKEQAREMADTACDSDVLLQLVLVWLSEVLGVIGDSPELVQRSFLVA
SVLPGPDGTVNSPARNADMQEELIASLEEQLKLNGEQSEEHSASAPRPRPPPEETVEPES
LHQLFEGESETESFYGFEEADLDLTEI
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgacctgtttatggaatgtgaggaggaagaactggagccatggcagaaa
atcagtgatgtcattgaggactctgtagttgaagattacaattcagtggataaaactact
cccgtttctgtgagccagcagccagctccagtgcctattgccgcccatgcttctgttgct
gggcccctctctacatccactgctgtcagtagcagtggggcacagaacagcgacagtaca
aagaagactcttgtcacactaattgccaacaacaatgctggtaatactttggtccagcaa
ggtggacagccacttatcctgacccaaaatccagcaccgggtctgggaacaatggttact
caaccagtattgagacctgttcaggtcatgcagaatgccaaccatgtgactagctccccc
gtggcctcacaacctatcttcatcactacccagggatttcctgtaaggaatgtccggcct
gtacaaaatgcaatgaatcaggttgggattgtgctgaatgtccagcaaggccagacagtt
agaccgatcacactggtcccagccccaggtacacagtttgttaagccgacagttggcgtc
ccacaagtgttctctcagatgacccccgtgaggccaggctccacaatgcctgtgaggccc
accaccaacacctttaccaccgtcatcccagctactctcaccatccgaagcactgtccca
cagtcacagtcccagcagaccaagtccacccccagtacctccactactcccactgccaca
cagccaacctcactggggcagctagctggtcagcctccaggccagtccaaccagacctcg
aatcccaaactagctccctccttcccctctccacctgcagtgagcattgccagcttcgtc
actgtgaagcgacccggggttacaggtgaaaatagcaacgaagtggccaaattggtgaat
actcttaacactatcccttccctgggccagagtcctgggccagtggtgatgtccaacaac
agttctgctcacagaaccagtggacccgaatcttcaatgaaagtgacctcttccatccca
gtgtttgacctccaggatggtggacggaaaatatgtccacggtgtaatgctcagttccgt
gttactgaagctttgagaggtcacatgtgttactgctgccctgaaatggttgagtaccaa
aagaaaggcaagtccctcgatgcagagcccagtgctccatcggcagcaaagccctcctcc
ccggagaagacagcccctgttacttccacaccttcctctacaccaattcctgctctctca
ccacctaccaaagtaccagagccaaatgagaatgctggcgatactgtccagaccaagctt
attatgctagtcgatgatttttactacggacgggatgggggcaaagcagcccagctcaca
agctttcctaaggttgccacatctttccgatgccctcattgtactaaaaggctaaagaac
aacattcgattcatgaaccacatgaagcaccacgtagaacttgatcagcagaatggcgag
gtggatggtcacactatctgccaacactgttaccgccagttctccaccccgtttcagctc
cagtgccacttggaaaatgttcatagtccctatgaatctactaccaagtgtaagatctgt
gagtgggcctttgaaagtgagcccttgtttctccagcatatgaaggacacgcacaagcct
ggagagatgccttatgtttgtcaggtgtgtcagtatcgctcctccctctactctgaggtg
gatgttcattttcgcatgatccacgaagatactcggcatttgctctgtccgtattgcctc
aaagtcttcaaaaatggcaatgccttccaacaacactacatgagacaccagaagagaaat
gtttatcactgcaacaaatgccggctgcagtttctctttgccaaggacaaaattgaacac
aagcttcagcaccacaaaaccttccgtaagcctaagcaactggaaggcttgaaaccaggc
accaaggtgacaatccgggcttcccgggggcagccacgaactgttcctgtgtcttcaaat
gatacaccttctggcgccttgcaggaggcagcacctctgacctccactgacccgctgcct
gtctttctgtatccccctgtccaacgcaatatccagaagagagctgttaggaaaatgagt
gttatgggccggcagacatgtctggagtgcagctttgagatcccagatttccctaatcat
ttccctacctatgtgcactgttctctctgtcgctacagcacctgctgctctcgggcttat
gccaatcacatgatcaacaatcatgttccacggaagagtcccaaatatttggctttgttt
aaaaattctgtaagtggaatcaagctggcctgcacttcctgtacctttgctacctccgtg
ggagatgccatggccaagcatttagtgttcaacccctcgcacagatctagcaacatctta
ccacgggggctcagttggatgtctcactcaaggcctggccagactcctgaacgagtgttt
gaccggagcatgaagaatacgtatcttccacctcctctcctccctaacaaaactgccact
gtgaaacctgtaggagccaccccagcagagcctcaggagctggcaggtcctatgctccag
gcacttccatcaccagcctcaactgcaaccccaccagcaacccccactcacccactgccc
tccgccctgccacccttggccacagaggggactgagtgtctgaatgtcaatgaacaggaa
gagggtagtcctgttacccaggaacctgagccagcatcgggtggtggaggtggcagtggg
gttggcaagaaagagcagctgtctgtgaagaaacttcgagtagtactgtttgccttgtgc
tgcaacactgaacaggcggctgaacactttcgaaacccccagcggcgaatccgtcgttgg
cttcgacgcttccaggcctctcagggagagaacttagagggcaaatatctcagctttgag
gcagaagaaaaactggctgaatgggtgctgatccagagagagcaacagctccctgtaaat
gaagagaccttgtttcagaaggccaccaaaatcggacgctctttggaagggggatttaag
atctcctatgagtgggctgtgcgctttatgctccggcaccacctcactccccatgcccgg
cgagctgtagcccacacattaccgaagcatgtagcagagaatgccggactcttcattgag
tttgtgcagcggcagattcacaatcaggacttacctttgtctatgattgtggctatcgat
gagatctctttgttcctggacacagaggtgctgagcagtgatgaccgaaaggagaatgct
ctgcagacagtgggcacaggggagccttggtgtgacgttgtgctggctatcctagcagat
ggcactgtcctccccaccctcgttttcttccgaggacaagcgaatcggcttgctaatgtg
ccagactctatattactcgaggccaaagacagtggctacagtgatgatgaaattatggag
gtttggtcaacccgtgtatggaagaagcacacagcttgtcagcacagcaaaagcatgctg
gtgatggactgccaccgcactcacttgtcagaagaggtattggccctgctcagtgcctct
agcactttgcctgcggtagtccccgcaggctgtagctccaaaatccagccactagatgta
tgcatcaaacgaactgttaagaactttctgcacaaaaagtggaaggagcaggctcgggaa
atggcagatactgcttgtgattctgatgtcttgcttcagctggtgttggtctggctgagt
gaggtgctgggtgtcattggggactccccagagctagttcagcggtccttccttgtggct
agtgttctgccaggtcctgatggcaccgttaactcacctgcacgcaacgctgacatgcag
gaggagctcattgcctctctagaggagcagctaaagctaaatggagaacagtctgaggag
cactcagcctctgccccccggcccaggccacctcctgaagagacagttgagcctgaaagc
cttcaccagctttttgagggggaaagtgagacggagtctttctatggctttgaggaggct
gacctagatctgacggagatttag
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