Amphiprion ocellaris (clown anemonefish): 111565427
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Entry
111565427 CDS
T06018
Symbol
ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111565427 (ddx43)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111565427 (ddx43)
Spliceosome [BR:
aoce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111565427 (ddx43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
111565427
NCBI-ProteinID:
XP_023121251
Ensembl:
ENSAOCG00000001331
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MSDWEDEYDEDGVVIQKPVAKSAPIERKVSFNDRQGQNVHFGVRSCGRFGAFSEGRANDS
GEGSQSKRWRNGGQRQTFDNFKLDSSRPVTFTVDNAVIGRIIGRGGAKIRELEDSTGARI
KINKGDYEPEVVIFGQSAAQQKAKEMIEDLVAEGGSRFSHGAGRRPDYGGGGDGVRNSSV
WSSTELQTANVVLAPPSIDWTTIRENKDKYEELKWKDLPPLKKKFYIEAESVSMLTAEEV
SEWRKENNNIFVDDLKEEGQKRPIPNPCRSFLEAFELYPEIMENIDRVGFVKPTPIQSQA
WPVLLSGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPVPRNERGGPGMLVLTPTRELALQI
ETECNKYRYKGYKSICIYGGGDRRGQINLVKGGVDIVIATPGRLNDLQMNELINLRSITY
LVLDEADRMLDMGFEPQIMKILLDIRPDRQTVMTSATWPTGVRRLAKSYLKNPMMVYVGT
LDLAAVNTVQQTVLIVHEEEKKSYVFDFIRNMLPQDKVLIFVGKKLMADDLSSDMCLQGL
AVQSLHGDREQCDREEALKDFKESRVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYV
HRVGRTGRAGRSGAAVTLVTRDNWRMAPELIPILERAGQEVPEELILMAERYEKHKREKD
LCNARGGQERGGGRGGGSGGGGGGRQGGGGGGGGWGRRDGGGRGGRDRGQNWGF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactgggaggacgagtacgacgaggacggcgttgttatccagaaacctgtggcc
aaatcagccccgattgagaggaaagtgtcctttaatgaccgccaaggacaaaatgtacat
ttcggtgtgagaagttgtggccggtttggagcctttagtgaaggcagagctaacgatagc
ggcgagggctcccagtccaaacggtggagaaacggaggacaaagacagactttcgacaac
ttcaagttggactcttcccggcctgtgacattcaccgtggacaatgctgtaattgggagg
atcattggtcgaggaggagccaaaatccgcgaacttgaagacagcaccggggcaaggata
aagattaataagggggactatgaaccagaggtggtcatctttggacagtctgctgcccag
cagaaagctaaggagatgattgaggacctggtggcagaaggcggctctcgattttcccat
ggcgctggcaggagaccagactatggtggaggaggtgatggagtaaggaacagctctgtc
tggtcttccacagaattacaaactgcaaacgttgtcttggcgccaccttccatagactgg
accaccatccgggagaacaaggacaagtatgaagagctcaagtggaaggacctcccaccc
ttgaagaagaagttttacattgaggcggagagtgtgtccatgcttacagcagaggaagtc
agtgaatggaggaaggagaataacaacatctttgtggatgacctgaaggaggaagggcag
aagcggcccattcctaatccctgtcgtagctttttggaggccttcgagctttacccagag
atcatggagaacatagaccgggtcggctttgttaaaccaacccccatccagtctcaggcg
tggccggtgctactgagtggagaggacctgatagctattgctcagacaggaacagggaaa
acactggcctacctgctgccaggattcattcacatggacggacagccagtacccagaaat
gagcgtggaggtccaggaatgttggtgctgactcccaccagagagctggccctgcagatt
gaaacagagtgcaacaagtaccgctataagggttacaaaagtatctgcatctacggtgga
ggagatagaagaggtcagatcaacctggtgaaaggtggagtagacatcgtgatcgccacg
ccgggccgactaaatgatctacagatgaatgagctcattaaccttcgctccatcacctac
ttggtgctggatgaggctgaccgtatgctagatatgggcttcgaacctcagattatgaag
attcttctggacatccgaccagaccgacagaccgtcatgaccagtgccacctggcccact
ggagtgagacgtttggccaaatcctacctaaagaatcccatgatggtgtatgtgggcacc
ctggacctggcagcggttaacacggtgcaacaaacagtactgatcgttcatgaagaggag
aagaagtcctatgtgttcgacttcatcagaaacatgctgccccaagataaagtcctcatc
tttgttggcaagaagcttatggctgacgacctctccagtgatatgtgtctgcagggtctg
gctgtgcagagtctccatggcgaccgtgaacagtgtgaccgtgaagaggctctcaaggac
tttaaagagagtcgagttcggatcctggtcgccacagatttggcgtctcgaggtctggac
gtccatgacataacgcacgtctttaactttgacttcccacgcaacatagaggagtacgtc
catcgcgtgggccgcactggccgagcaggacgttcaggtgctgctgttaccctggtaaca
agagacaactggaggatggcccctgaactgattcccatcctggagcgagcaggacaggaa
gtccccgaggaactgattctaatggcagagagatacgaaaagcacaagagggagaaggac
ttgtgcaatgcaagaggaggacaggagcgaggaggaggaagaggaggaggaagtggagga
ggaggtggaggaagacaaggtggcggtggaggaggaggaggatgggggagaagagatggc
ggagggagaggcggcagggatcgtggccaaaactggggattctaa
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