Alkaliphilus oremlandii: Clos_2288
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Entry
Clos_2288 CDS
T00607
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aoe
Alkaliphilus oremlandii
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoe03400
]
Clos_2288
DNA repair and recombination proteins [BR:
aoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clos_2288
Archaeal homologous recombinant proteins
Clos_2288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
Aurora-A_bind
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABW19821
UniProt:
A8MJ39
LinkDB
All DBs
Position
complement(2442984..2446508)
Genome browser
AA seq
1174 aa
AA seq
DB search
MRPSLLKIKGINSFHNEQIINFNRLVEKGLFGIFGPTGSGKSSILDAITLALYGNIARDS
KEFINTEADRGEVSFEFEILDGSLRKTYRLERGIKRKKNGGIETTVARIIEINGEEVTVL
ADSVTSVNNEVIRVIGLNAEDFTRSVVLPQGKFSEFLKLTGRERRNMLERIFGLEQYGKN
IVEKINAERKKYDAKRMDLEGQLKSYEGVNESYYKEVSEKLHLLLVEEKALKKEIEDLDK
EYQQSKKIWELQGEMASYKGMEVLLREKRTEIEEKRKTFILGEKANQLKAYVQNLKSLEE
RINQNQLALDALEKELPKISKLLKELEDRYQNALICKEEKFPKFIAKIENCKQAEKIEQQ
NLILAKEIEGLEKIYHYHCNLSKEKSQELEKSKNKVAQLQREVVVIEKTLEEIYLEPSHR
EALEEGYTLNKDRNRLKVEKNEAEKILRDLDKVIEENKVQLKDELEARQQLESVLKSFFE
EKTSLENSPLKEEGTIFAKKTELDQKKNQWKALEQNLSQKIDLNKAIQQLVKTRESLQEQ
QEKYIVDIQQAESQLEGLKEESRNIEIEYLALKLSEHLHHGEACPVCGSKDHPNPAVGGE
VASTADYHHRIQEMTTVTSTLKEKKVDLDIRIAEILKEEELKRSDLAILENLMKDVNLEV
LLEEIRKLEVEIPALMKEREAYLQGKNKLEEGIERYKEKISLANTRITELSTKIEKDGEN
QDTIRLKLDERSQRIKYLSAIIEKINKDLKIEDIAVEYERIKEMDKERSKKEKELKDLRK
AVEMENRQKETLQNEVNALNLEKVKNQQQLDGNKEKLSLAREEIKMLTDGNNPTAYKTAL
QNEMQKVEAEEKELKGRVEKGRGIQQSKLEEKAIAENNKVNLVQEYALKVQELEKLSKEK
GFSSIEEIQGYLFEDQKLDILEDEITAYDDEVKKVNQNLERIQKALDGRAITVDQWETLE
KSLTTKKNIQEEKAKEIGEVQQTLKDTNVKLEAMKQLKKEENKITHQLDLLSELSKMLEG
NRFVEYVAINQLKYIAREASKWLKDITRGRYALELDSSGNFIMRDDFNGGIRRATNTLSG
GETFLTSLSLALALSSHIQLKGSAPLEFFFLDEGFGTLDSDLLEIVMTALERLHSEKLSV
GIISHVEELKNRVPIKLMVFPPEFGGEGTRVKII
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcctagcctattaaagatcaagggaatcaatagctttcataatgaacaaatcatc
aattttaatcgattggtagagaaggggctcttcggtatttttggacctacgggcagtgga
aaatcctccatattagatgccattaccctagcgctctatggcaatattgcaagagattcg
aaagagtttatcaatacagaagccgatcgaggagaggtctccttcgagtttgagatcttg
gatggaagcctacgaaaaacctacagactggagcgtggtattaagcgtaaaaaaaatggt
ggcatagaaacgactgtagctcgaatcatagaaatcaatggagaagaagtaactgtactg
gcagatagtgttaccagtgtgaataatgaagttatccgagtgattggactaaatgcagag
gactttacacgttccgtagttctgccccaaggaaagttcagcgaatttttaaagctaaca
ggcagagaaagacggaatatgctggaaagaatctttggtttagagcagtatggcaaaaat
atcgtagaaaaaattaatgcagagcgaaagaaatatgatgcaaaacgaatggacttagaa
ggacagttgaagagctatgaaggagtgaacgagagctactacaaagaagtatcggagaaa
ctacatttattattggtggaagagaaggctctgaagaaagaaatagaagacttagacaag
gagtaccagcaaagtaaaaaaatctgggaattacaaggagaaatggcatcctacaaaggg
atggaagttttattgagagaaaaaagaacagaaatagaggagaaaagaaaaaccttcatt
ttaggagaaaaggccaatcaattaaaggcttatgtgcaaaacctaaaatctttagaggag
agaatcaaccagaaccaattggccttagacgctttggaaaaggagctgccgaagatcagt
aagttattgaaagagttagaagaccgatatcaaaatgctttaatatgtaaggaggaaaag
tttccgaaatttatagcaaaaatagaaaactgcaaacaagcggagaaaatagagcagcag
aacttgattttagcaaaagaaatcgaagggcttgaaaaaatttaccactatcattgcaat
ttgagcaaagaaaaatcccaggaattggagaaatcaaaaaataaggtggctcagcttcaa
agggaagtcgtggtcatagaaaaaactttagaggaaatatacttggaaccatctcatcga
gaagctttagaggaaggatataccttaaataaggatcgaaaccgactaaaagtagaaaaa
aatgaagcagagaagattctgcgggacttagataaggtcatagaggaaaataaggttcag
ctaaaggatgaattagaggcgaggcaacagttagaatctgtattgaaatccttttttgaa
gagaaaacttccttggaaaatagcccgttgaaagaagagggtacgatatttgcgaagaaa
acagagctggaccaaaagaaaaatcaatggaaagccttagaacaaaatctatctcaaaaa
atagatctgaacaaagccatccagcaattagtaaaaacgagagaatctctacaagagcag
caggaaaaatacatagttgatatccagcaggctgaaagccagttagaagggttaaaggaa
gaaagcagaaatatagagattgaatatcttgcactaaagctatctgaacatctgcatcat
ggagaagcctgccccgtatgtggctctaaggatcatccaaatcctgctgtgggtggagaa
gtggcctcaacagcggattatcaccatcgtattcaagaaatgacgacagtgacgtctaca
ttgaaagagaagaaggtggatctggatattcgcatcgctgaaatattaaaggaagaggaa
ttaaagagatccgacttagctatactagaaaatcttatgaaggatgtaaacttggaagtg
cttttagaagagattcgtaagctagaggtagaaataccagctttaatgaaagagcgggaa
gcttatctccaaggaaagaataaactagaggaagggatagagcggtataaggagaaaatc
agccttgcgaacactaggattacggagttgagcaccaagatagaaaaagatggtgaaaat
caagatacgatccgcctaaaactggatgagcgatctcagaggataaagtatttatctgca
atcattgaaaaaataaacaaagaccttaaaattgaagatattgctgtcgaatatgagcgg
atcaaagaaatggataaagaaaggtcgaaaaaggaaaaagaattaaaagatttaagaaaa
gctgtagaaatggaaaatcgacaaaaagagactttacaaaatgaagtgaatgctttgaac
ttagaaaaggtaaaaaatcaacagcagctagatggaaacaaggaaaaactatctttagcc
agagaagagatcaaaatgttaaccgatggaaacaatcctacagcctataaaactgcttta
caaaatgaaatgcagaaggtagaggcagaagagaaggagctaaagggaagagttgaaaaa
ggtagagggattcagcagagtaagctggaggaaaaagccattgcagaaaacaacaaagtt
aatctagtgcaagaatatgctttgaaagtccaagagttagaaaaactctccaaggagaaa
ggatttagctccatagaggaaatccaagggtatttgtttgaggatcagaaactcgacatc
ttagaagatgaaataactgcctacgatgacgaagtaaaaaaagtgaatcagaatctagag
cggattcagaaagctttagatggaagagctataactgtagaccaatgggagaccctagaa
aagtccctgaccactaaaaagaatatccaggaggagaaggctaaggaaattggcgaagtg
cagcaaacccttaaggatacaaacgtgaagctagaagctatgaaacaactgaaaaaagaa
gagaacaagataacccatcagttggatttactttcagagcttagtaaaatgttggaggga
aatcgttttgtggagtatgtggccatcaaccagctaaaatatatcgcaagggaggcctct
aaatggctaaaggatattacaaggggacggtatgccttagagctggacagtagcggcaac
tttattatgcgggatgattttaatggtgggattcgaagggcaaccaacaccctttcagga
ggagaaacattcttaacctccctgtctcttgcgctggcattatcctcccatattcaattg
aagggaagtgcaccgctggaattcttctttttagatgaaggcttcggtacattggatagc
gatcttcttgaaattgtaatgactgctttagaaagactgcattcagaaaaattaagtgtt
ggtattatcagtcatgtggaggaacttaaaaatagagtacccattaagctgatggtattc
cctccagaatttggtggtgaaggaactcgtgtgaaaattatatag
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