Asparagus officinalis (garden asparagus): 109830894
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Entry
109830894 CDS
T05243
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109830894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109830894
03036 Chromosome and associated proteins [BR:
aof03036
]
109830894
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109830894
Coactivators
SAGA/TFTC/STAGA complex
109830894
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109830894
STAGA complex
109830894
TFTC complex
109830894
SAGA complex
109830894
SLIK complex
109830894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
TFIID-31kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
109830894
NCBI-ProteinID:
XP_020253840
LinkDB
All DBs
Position
2:17828662..17840577
Genome browser
AA seq
473 aa
AA seq
DB search
METPPSTSAPTDAPAPSSDPPPSSSSDPPPSTPIEPPASSAPSPNPSPSPAQSQTLEPQQ
PPQLQQRTLPAISRPRPPTQPIPRSGLGGGGIGVPAGYSHHHAAVVCSFFRPFGGPSSSH
MQPFAAVPRGSVGGPDQARQPVPGVQTIGMIGSLSTSQMRPTGALGQNQQRLGQPQLRSV
TPPSQGLNSQKFPSHLGPRGPSITSPVTQSLASQSSQPLHQQWMSSQAKQSNVASLPSSS
YRPQMRPPTMQQRPHLPQHHQQTSISQQQQQQKQHQLQQIQHMQQQSSLQNQSQDNHPLR
NQPNIPSQHQASQALVPTVQKSNVQALAQPGLGSNDTEEISNDIISRKRIRELVTQVDRS
EKLRPEIEDDLLEIADDFIESIVTAACHLAKHRKSTTLEAKDILVHVERHWNMSLPGFSG
DEIKCYKKPSTNDIHKERLAMIKKSMIGTQDGGTSTKTPASGSGQAAANPKLH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgccaccatcaacatccgcacccacagatgcacccgccccctcctcggaccca
ccaccgtcatcgtcctcagatccgccgccttctaccccaatcgaaccaccagcatcatca
gccccatccccaaaccctagccctagccctgctcaatcccaaaccctagagcctcagcaa
cctcctcaattgcagcagcggactctgccggcgatctcgcggcctcggccaccgacccaa
ccgatcccaagaagcggcctcggcggaggagggattggagttcctgctggatattcgcat
catcacgccgccgtcgtctgttccttttttcgtccgttcggcggcccgagttcttctcat
atgcagccctttgctgcagtgccgaggggttctgttggtgggcccgatcaggctaggcaa
cctgttcctggagttcagacaatagggatgattggttcgttgagtacttctcagatgaga
cctactggggctcttgggcaaaatcagcagagacttggtcagccacaacttagatcggtg
actccacctagccagggtttaaactctcaaaaattcccgagtcatcttggcccaagaggt
ccttccattacttctcccgttacccaatcacttgcatcacaaagttcccaacctcttcat
cagcagtggatgtcatcccaagcaaaacaatcaaatgtagcttctttaccttcctcttct
tacagaccccagatgagaccaccaactatgcagcaaaggcctcatcttccacagcatcac
caacaaacatcaatttctcagcagcaacagcagcagaagcaacaccaactacaacaaata
cagcatatgcaacagcaaagctcactgcaaaaccagtcacaagacaaccatccacttagg
aatcaaccaaatattccttcacaacatcaagcttcacaagctcttgtacctacagtgcaa
aagtcaaatgttcaagctttggcccaacctgggttgggatctaatgatactgaagagatc
agtaatgatattataagcaggaagcgtatacgagaattggtaacacaggttgatcggtct
gaaaagttgcgtcctgaaattgaagatgacctcctggagattgctgatgatttcattgaa
tctatagttacagcagcttgccatttggctaagcatcgaaaatcaactacattagaagcg
aaggacatacttgtacatgtagagagacattggaatatgtccttgcctggctttagcgga
gatgagatcaagtgttacaagaagccgtccacaaatgatattcataaagagaggcttgca
atgatcaagaagtctatgataggaacacaagatgggggtactagtacaaaaactccggcc
tcaggtagtgggcaagctgctgcaaatccaaaactccattga
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integrated database retrieval system
