Asparagus officinalis (garden asparagus): 109839493
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Entry
109839493 CDS
T05243
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aof03036
]
109839493
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Meiosis-specific proteins
Others
109839493
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Pox_A32
AAA_27
Motif
Other DBs
NCBI-GeneID:
109839493
NCBI-ProteinID:
XP_020263532
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Position
4:complement(137203302..137255334)
Genome browser
AA seq
797 aa
AA seq
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MEDAGGGDDRSSYVCGLIENRAKEVGVAAFDLRSASLHLSQYIETSCSYQNTKTLLHFYD
PMVIIVPAIKLAPDGMAGVSELVDKHYSSNKKVIMSRGCFDDTKGAVLIKNLAAKEPSAL
GLDTYYKQYYLCLAAAAATIKWTEAEKGVIITNHSLAVTFNGSCDHMNIDATSVQNLEII
DPLCTELWGSNNKKRSLFQMLKTTKTIGGSRLLRANLLQPLKDIKTINARLDCLDELMNN
EELFFGLSQGLRKFPKETDKVLCHFCFKPKKITEEILKPANGRKSQLLISNIIILKTALD
ALPFLTKVLKDAKSFLLCNIYRSVCENEKYACMRQRIGDAIDEDVLHARSPFVACTQQCF
AIKAGIDGLLDVARRSFCDTSEAIHNLANKYREEFKMPNLKIPYNNRQGFYFSIPQKDIT
GKLPEKFIQVVKHGKNMHCSSVELASLNIRNKSAAAECFMRTEFCLEGLIDDIRKDISIL
TLLAEVLCLLDMLVNSFANMISTKPVDRYTRPEFTVNGPMAVDAGRHPILESLHNDFIPN
NLFLSEASNMVVVMGPNMSGKSTYLQQICLIIILAQIGCYIPARFASLRVVDRIFTRIGS
GDNVEYNSSTFMTEMKETAFLMQNISPRSLVVMDELGRATSTSDGYAIAWSCCEHLLSLK
AYTIFATHMEELSELATIYPNVKILHFEVDLRNNRLDFKFCLKDGPRQVPHYGLLLAGVA
GLPSSVVETARSITTKITDKEVERMDINCEQYHSIQMAYRVAQRLICLKYSQQGEDETRR
ALQNLKESYTEGGSSRG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcaggcggaggagacgatcgatcgagctacgtctgtggattgatcgagaac
agagcgaaggaggttggtgtggccgcctttgacttgcggtcggcttctctgcatctttca
caatacattgaaacaagctgttcatatcaaaatacgaagaccctactgcacttctatgat
cctatggtaataattgtgcccgcaatcaagctggcaccagacggtatggctggagtctca
gagcttgtagataaacattactcttcaaacaaaaaggtcataatgtctcgtggctgtttc
gatgataccaagggagctgttttgattaaaaatttggcagctaaggagccatctgctctt
ggcttagatacttattacaaacaatattatctttgcctagctgccgctgctgcaacaatc
aaatggactgaagcggagaagggtgtgatcattacaaatcattctttagcggttactttt
aatggctcatgtgatcacatgaatatagacgcgacaagtgtccagaatttggaaattatt
gacccattgtgtactgaactctggggcagtaacaacaagaagagaagtctgttccagatg
ctgaagacaacaaagactattggagggtctagactacttcgagcgaacttgttgcagcct
ctgaaagacattaaaaccatcaatgctcgtctagattgcttagatgagttgatgaacaat
gaagagttattctttggtctatcccagggtctccgtaaattccctaaagagactgataag
gttctatgccacttctgttttaaaccaaaaaagatcactgaagaaattttgaagcctgcc
aacggaagaaagagtcaattgttgatatcgaacattatcattctgaaaacagctctagat
gccttgccttttcttacaaaggtgctcaaggatgcaaagagttttctgctttgcaatatt
tacagatctgtttgtgaaaatgaaaaatatgcctgcatgagacagagaattggtgatgcg
atcgatgaagatgttttacatgcaaggtctccctttgttgcctgcacacaacaatgtttt
gccatcaaagctggaatagatgggcttcttgatgttgcccggcgttctttctgtgataca
agtgaagctatccataaccttgcaaacaaataccgtgaggaatttaagatgccaaatttg
aagattccttataataataggcaaggattttactttagcattccccaaaaggacataact
ggaaaacttcctgaaaaatttattcaggttgtgaaacatgggaagaacatgcactgctca
agcgttgaacttgcttcactaaacatcaggaataaatctgcagcagctgaatgttttatg
aggacagagttttgcttggaaggactaattgatgacataaggaaggatatttccattttg
acactgctcgcagaggtcttgtgccttttagatatgctagtcaattcctttgcaaacatg
atatctactaagcctgtcgatcgctatacaagaccagaattcacagtaaatggtccgatg
gcagtcgatgctggacggcacccgattttagaaagcttgcacaatgattttattcctaac
aatcttttcctatcagaagcatcaaacatggtggttgtcatgggcccaaacatgagtggc
aaaagcacttatcttcaacaaatttgcttaatcattatcctcgcacaaattgggtgttat
attcctgcgcgttttgcgtcactaagagttgttgatcgcatattcactcggatagggagt
ggagacaatgttgaatataactctagcacttttatgactgaaatgaaagagaccgctttc
ttgatgcaaaacatttctccaaggagccttgttgtcatggatgaacttggaagggctact
tctacctctgatggatatgcaattgcttggagctgttgtgagcatttactttctctcaaa
gcgtatactatatttgctacacacatggaagagttatctgaattggcaaccatctatcct
aatgtcaagattcttcattttgaagttgatttgaggaacaatcgcttagacttcaagttt
tgcctcaaggatggaccacgccaagtaccacactatggcctcttactggctggagttgcg
ggtctaccaagttctgtggttgaaacagcaagaagcatcaccacaaagatcacggataag
gaagtggagaggatggatataaactgcgagcagtaccattcaattcaaatggcgtacaga
gtagctcaaagacttatttgcttaaaatactcccagcaaggtgaggatgagacccgaaga
gctttgcaaaatcttaaggagagctacacagaaggtgggagttcgcgtggttaa
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