Asparagus officinalis (garden asparagus): 109841325
Help
Entry
109841325 CDS
T05243
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3 isoform X1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109841325
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
109841325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
WDR54
Ge1_WD40
PROPPIN
Motif
Other DBs
NCBI-GeneID:
109841325
NCBI-ProteinID:
XP_020265847
LinkDB
All DBs
Position
5:complement(129450970..129461778)
Genome browser
AA seq
403 aa
AA seq
DB search
MELLVASSSVDSTIGSWDLRSGSEQLRYRSSASPPHGLLSVSRRFLASSQIRDSPKSSSS
QILFWSWDKPQIEVRSFPAEPIGPIVSNSDGAYIVGGGSSGSIYLWEVASGKLLNKWHAH
YRSVTCLTLSDDESLLISGSEDGCVRVWSLLMMFDDMGKEAARNLYKYSFSEHSLRVTDV
VCGHGLCNSIIISSSEDRTCKIWSLSEGILLRNIVFPSVIDAIAMDPGEHAFYAGGRDGR
IYIAALNAEPDPDNRYGMYIIGSLSDQSKAVTCLTFSTDGVTLVSGSEDGMVRVWDTKSQ
HVSRVLKHGKGPVSNVLIVRQPLRSGPQGFGNSQVSMSRKRSNLSLPPPLEKYIKTSDAE
AGNKSLAVLHPSWQDSHDSQYCSSYIMESQIKDLQEKHLPTQS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggagcttctcgtcgcgtcctcatccgtcgactccactatcggatcctgggaccttcga
tctggatccgaacagctccgataccgctcctccgcctcccctcctcacggcctcctctcc
gtttcccgccgtttcctcgcctcctctcaaatccgcgactcccccaaatcctcatcctct
cagattctcttttggtcttgggacaagccccaaattgaggtcagaagttttccagctgag
cctattgggccgattgtgtcgaattctgatggggcttatatcgttggtggtggctcttct
ggttccatttatttatgggaggtggcaagtggcaagctgctgaacaagtggcacgctcac
tacagatctgtcacttgccttacattgtctgatgacgagtctctattgatatctggatcg
gaggatggatgtgtcagagtgtggtcacttttgatgatgttcgatgacatggggaaggaa
gctgcaaggaatctctacaaatatagtttctcagaacacagtttacgtgttactgatgtt
gtttgtggtcatggactttgcaactctatcattatctcatcttctgaggaccgtacctgt
aagatttggagcttatctgaaggtatattattgaggaatattgtgtttccttccgtaatc
gatgcaattgcaatggaccctggagagcatgcattttatgctggtggtagagatggcagg
atatatattgctgcacttaatgctgaacctgatcctgacaaccgttatggaatgtacatc
attggatccttatctgaccaaagcaaagctgtgacttgcctaacatttagcacggatgga
gttactctggtttctggatcagaggatggtatggttcgggtttgggatactaaaagtcag
catgttagtcgtgtacttaagcatgggaaaggtcctgtcagtaatgtcctcatagttagg
caacctctccgctcaggtcctcaaggatttggaaattcccaagtatccatgtctagaaag
cgatcgaatttgtcactgccaccacctttggagaagtatataaagacatcagatgcagaa
gctggaaataaatctttagctgttcttcacccatcttggcaggattcgcatgatagccaa
tattgcagctcctatatcatggagagtcaaatcaaggaccttcaggaaaagcatcttccc
actcagagttga
DBGET
integrated database retrieval system
