Asparagus officinalis (garden asparagus): 109848719
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Entry
109848719 CDS
T05243
Name
(RefSeq) cyclin-dependent kinase D-1-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03022
Basal transcription factors
aof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109848719
09124 Replication and repair
03420 Nucleotide excision repair
109848719
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aof01001
]
109848719
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109848719
03019 Messenger RNA biogenesis [BR:
aof03019
]
109848719
03400 DNA repair and recombination proteins [BR:
aof03400
]
109848719
Enzymes [BR:
aof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
109848719
2.7.11.23 [RNA-polymerase]-subunit kinase
109848719
Protein kinases [BR:
aof01001
]
Serine/threonine kinases: CMGC group
CDK family
109848719
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109848719
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
109848719
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109848719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
109848719
NCBI-ProteinID:
XP_020273956
LinkDB
All DBs
Position
7:61516745..61525341
Genome browser
AA seq
443 aa
AA seq
DB search
MAMMASSSSQQQQQNLQSLNPNRGGGGGEEDKGEKIVADRYLKRELLGEGTYGVVFKALD
TKTGQTVAIKKIRLGKHKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFM
ETDLEAVIRDRNILLSPADIKSYMQMTLKGLAVCHKKWVLHRDMKPNNLLISADGQLKLG
DFGLARIFGSPDRKFTHQVFARWYRAPELLFGSKQYGPGVDVWAAGCIFAELLLRRPFLQ
GSSDIDQLGKIFAAFGTPKPSQWADMVYLPDYVEYQHVPAPSLRSLFTASDDALDLLSRM
FTYDPKARISAQQALEHRYFSSQPLPTIPEKLPRPHRKGDSLNHYPSDFVSQDAPLVLSP
SRKMRRVTPHHGAFEGNAHEKAGHARDSRHVGESTGPSGNILMSIDFEALHGSRPPPRPT
LNSADRSHLKRKLDLDPDFGYSH
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatggccagctcttcatcgcagcagcagcaacaaaatcttcagagtctaaat
ccaaaccgcggcggcggcggcggcgaagaggacaaaggggagaagattgtggccgaccgt
tatttgaagagggagctcctcggtgaaggaacctatggcgtcgtcttcaaagccctagat
accaagacaggacagacagttgcaattaagaagattcgtctggggaagcacaaggaaggt
gtaaattttactgctctgagggaaattaaactcctcaaggagctcaaggatccaaatatt
atcgagctaattgatgcttttcctcacaagggtaacttgcatcttgtatttgagttcatg
gagaccgatttggaagctgttattcgtgatcggaatattctgctgtctccagctgatatt
aaatcttacatgcaaatgacactgaaagggcttgcagtttgccataaaaagtgggttttg
cacagggatatgaagcctaacaacttgctgatttctgcggatggccaactgaagcttggt
gactttggtctggcacgcatttttggcagtccagatcgcaaatttactcaccaggtcttt
gctcgctggtatagagcacctgaattattattcggcagcaagcagtatggtcccggagtg
gatgtgtgggctgcaggctgcatatttgctgaactccttctaaggcggccatttctgcag
ggttcaagtgacatcgaccagcttgggaagatctttgcagcttttgggacaccaaagcca
tctcaatgggctgacatggtttaccttccagattatgtcgaatatcagcatgttcctgca
ccttcattacgctccctgtttacagctagtgatgatgctttagaccttttatcaaggatg
ttcacctatgatccaaaagcaaggatctctgcccaacaggctcttgagcacaggtatttt
tcttcccaaccactaccaacaataccggaaaagctcccaaggccacaccggaagggagat
tcattaaatcactatccttcagactttgtttcacaagacgctcctcttgttttatctcca
tcgagaaaaatgaggagggtgacaccccatcatggggcatttgaaggaaatgcacatgaa
aaggctggtcatgcgagggacagtagacatgtaggcgagagtactgggccgagtggaaat
atcctaatgtcaatagatttcgaagcccttcatggctcacgaccccctccaaggccaact
ctaaatagtgccgataggtctcacctcaagagaaaacttgatttggatcctgacttcgga
tattctcactga
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