Aspergillus oryzae: AO090003000927
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Entry
AO090003000927 CDS
T01018
Name
(RefSeq) unnamed protein product; polyadenylate-binding protein (RRM superfamily)
KO
K13126
polyadenylate-binding protein
Organism
aor
Aspergillus oryzae
Pathway
aor03015
mRNA surveillance pathway
aor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AO090003000927
09123 Folding, sorting and degradation
03018 RNA degradation
AO090003000927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090003000927
03041 Spliceosome [BR:
aor03041
]
AO090003000927
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AO090003000927
mRNA cycle factors
Stress granule specific factors
AO090003000927
Spliceosome [BR:
aor03041
]
Complex C
Other components
Complex C specific factors
AO090003000927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_7
MARF1_RRM1
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
5992028
NCBI-ProteinID:
XP_001820045
UniProt:
Q2UK72
LinkDB
All DBs
Position
2:4614039..4616462
Genome browser
AA seq
765 aa
AA seq
DB search
MSADASTTPAADSNVTSTPETSTTPAAPAPEVTAVESTTAPNASQPHSASLYVGELDPSV
TEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPC
RIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG
FVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQD
VTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKL
YVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTIT
SAKVMRDTNIERTQTPESDKEKENKEATKENEKESSEAEKAEKTEEKPADSGDEKKEDKE
SKKADKKGLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEA
SIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPGQRGGIAFPPQPGMVMAGIPG
GRPGQYPGPFPGQQGGRGMGPNQQLPPNFQGIPMGAMQGPVPNGMGYPQGMAQVQFGRGA
GGRGQVPGMPNMGQGMRGPGYGQGRGGVPVQQGQMRPGQGGRGQNAAQAPAGRPEEAVAG
GLTAQALSAAPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMENTELLSLLEDEEAL
RAKVDEALNVYDEYMKNKGGESEATGEAAKPKEAAKETSTEENKS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgacgcctctaccacccccgctgctgacagcaatgtcaccagcacccccgag
accagcaccactcctgctgctcctgctcccgaggtcactgctgttgagagcaccactgct
cccaatgcttcccagccccactctgcctctctctatgtcggtgaactcgacccctctgtg
actgaggccatgctctatgagcttttctcttccatcggccaggttgcttccatccgtgtc
tgccgtgatgctgttaccagacgctctctgggatatgcttatgtcaactacaacaacacc
gccgacggtgagcgtgctctcgaagatctgaactacaccctgatcaagggcaagccctgc
cgtatcatgtggtctcagcgtgaccccgctctgcgtaagactggccagggcaacgtgttc
atcaagaacctggatagcgccatcgacaacaaggctcttcacgatacctttgctgccttc
ggtaacatcctcagctgcaaggtcgcccaggatgagttcggcaactctaagggatacggt
ttcgtccactacgagactgctgaggctgctaacaacgccatcaagcacgtcaacggcatg
ttgctgaacgacaagaaggtcttcgttggccaccacatctcgaagaaggaccgccagagc
aagttcgaggagatgaaggccaacttcaccaacgtctacattaagaacattgaccaggat
gtcaccgaggaggagttccgtgagctcttcgaaaaattcggtgagatcacctccgccacc
ctcagccgtgaccaggagggcaagagccgtggtttcggtttcgtcaacttctctacccac
gagagcgcgcaggccgccgttgacgagatgaatgagaaggagatccgtacccagaagctc
tatgtcggccgtgctcagaagaagcacgagcgtgaggaggagctgcgcaagcagtacgag
gctgcccgcttggagaaggcctccaagtaccagggtgtgaacctttacgtgaagaacctc
accgacgacgttgatgatgagaagctgcgcgagctcttcggaccttatggcaccatcacc
tctgccaaggtcatgcgcgacaccaacattgagcgtactcagactccagagtccgacaag
gagaaggagaacaaggaagccaccaaggagaacgagaaggaatcctcagaggctgagaag
gccgagaagaccgaggaaaagcccgctgactctggcgatgagaaaaaggaggacaaggag
tcgaagaaggccgataagaagggtctcggaaagagcaagggctttggtttcgtctgcttc
agcagccccgatgaagcctccaaggctgtcactgagatgaaccagagaatggtcaacggc
aagcctctttatgttgcccttgctcagcgcaaggacgtccgcagaagccagctggaggcc
agcattcaggctcgcaacactatcagacagcagcaggctgccgctgccgctggcatgccc
cagccctacatgcagcccgccgttttctacggacctggccagcagggcttcattcccggt
cagcgcggtggcattgccttccctcctcaacccggtatggtgatggctggtatcccaggt
ggacgccccggtcagtaccctggtcctttccctggtcagcagggtggtcgtggcatgggc
cccaaccagcagcttcctcctaacttccagggcatccccatgggcgccatgcagggccct
gttcctaacggcatgggctaccctcagggcatggctcaggtgcagttcggacgcggtgct
ggtggccgtggtcaggttcccggaatgcccaacatgggtcagggtatgcgtggccctggc
tatggacaaggccgcggtggtgtgcccgtccagcaaggccagatgcgtcctggtcaaggt
ggccgtggacagaacgccgctcaggcccctgccggacgtcccgaggaggccgttgccggt
ggtctcaccgcccaggctctctcagccgccccccctcctcagcagaagcaaatgctgggt
gaggccctctaccccaagatccaagctcagcaacctgagttggcaggcaagatcactggt
atgcttctagagatggagaacaccgaattacttagcttgcttgaggatgaggaggccctg
cgcgccaaggtcgacgaggccctgaacgtttatgatgagtacatgaagaacaagggaggc
gagagcgaggcgaccggagaggctgccaagcccaaggaggctgccaaggagacctctacc
gaagagaacaagtcgtaa
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