Avibacterium paragallinarum: EIA51_06340
Help
Entry
EIA51_06340 CDS
T05728
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
apag
Avibacterium paragallinarum
Pathway
apag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EIA51_06340 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apag03400
]
EIA51_06340 (recB)
Enzymes [BR:
apag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EIA51_06340 (recB)
DNA repair and recombination proteins [BR:
apag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EIA51_06340 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_25
ResIII
AAA_12
AAA_11
MRG
CENP-F_C_Rb_bdg
Motif
Other DBs
NCBI-ProteinID:
AZI15249
LinkDB
All DBs
Position
complement(1330439..1334074)
Genome browser
AA seq
1211 aa
AA seq
DB search
MTTKTEILNPATLPLQGVSLIEASAGTGKTYTMASLYIRLLLQAGENCFDQPLPVDKILV
VTFTDMATQELRERIRARIYQSKQLLLQYQASSDPQVFIAGGDPLLGELVKTLPDLSQSI
QRLSWAEQSMDTAAIYTIHSFCRRMLMQYAFNSGVHFNLELVRDESELLERLTNEFWRET
FYHQPLAIAQFIQRELYNPQELLKKIEPYLGAETFNVALSDASLLDLSLDEFFQQRLLPL
YQSISHFKQQWLSNEQALFDLLEENKSSQKNYRTSWVESRFNKMRQWANNPNDFALPDVF
EHFTTAKIIEKTKAGSTPLQHFLFEQAEALAQQQECSTLSLPLVLYHCITGIRQKLIHYK
QQHVEKGFDDLLRLVRDGLYAENGQELATLIRNQYPFAMIDEFQDTDAQQYQIFSKIYIE
NAPQQSGFIMIGDPKQSIYKFRGADIFTYFKASQQADHRFTLQENWRSTAELIECVNGIF
NFSSPPPFLFDDIQFSPVKAGKALPAFNLNGQDEPALSCYLSEKNDRQAFAQYCAISIQQ
WLKSAVQNQAHFSDQPLKAKNIAVLVRNRHEAELVKTALQNLGIASVYLSDKSNVFDSPT
AQEMALILQACLNPLNERYILNAIATRLFHFTSAEIYQIKQDENAWENLVEQFFAYQKTW
QQKGILVMLHQLLLNSDLTQRLLANAQSERTITDFLHLAELLQQASRLNESEAGLLRWFE
KQIQGTDRLEETIRLESERDLVKIVTIHKSKGLAYDLVWLPFISAPAKNKKNAISTYYSP
QQEKVLWDMENQQQDQVDKETFAEELRLLYVALTRAKYQVAMCLPKTFEASWNSFLYVLT
EGEIGQETALKKKDYQAEPLLRALQQKVGTNALALREASELTPSEAIMPTTAEQHFSPAI
FRGKIEYHWGVTSFTDIVHKHQRNKLHALDSAQDQSAVEMFKVFDQSRDYDFNLPAETSM
AENAILLEENPLQDSPYPQGFSPFELPSGVRVGTILHRYLEKNTAQSAIEEENLQKLCKQ
LQLDEQWISPLKQWFEAIYHSPLLAGESLSLAQIQPQDCLKEMQFYLKLSKNFDAAGFNR
ALSQYHPYPSQALIFERLKGMLRGFIDLVFRHNGKYYILDYKSNLLGNQAENYQPDRLPA
VMQQGFYDWQYLLYSLALHRYLRQRDPHYQYERDFGGVIYTFLRGMNGQDQTGVFFDKPD
WRLIQALEELF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaaaacagaaatacttaacccagctacattgcccttgcaaggagtgagcttg
attgaagcctcagcaggcacgggtaaaacttacacaatggcttcattgtatattcgttta
ttgctccaagcgggcgaaaattgctttgaccagccgttgcctgtggataaaattttggtg
gttaccttcacggatatggcaacgcaagaattgcgggagcgtattcgagcaaggatttat
caaagcaagcaattattgcttcaatatcaagccagtagtgatccgcaggttttcatcgcg
ggtggtgatcccctattaggcgagctggttaaaaccttgcctgatttatcgcaaagtatt
caacgcctgagctgggcagagcagagtatggacaccgctgccatttacacgatccatagt
ttttgtcgtcgtatgctaatgcaatatgcctttaactcgggcgtgcattttaatttggaa
ttggtgagagatgagagcgaattgctcgaacgcctcaccaatgaattttggcgagaaacc
ttttatcatcagcctcttgcgatcgcacagtttatccaaagagaactctataatccgcaa
gaattactgaaaaaaattgagccttatttaggggcagaaacctttaacgttgccctttct
gacgcgagtttgctggatttatcccttgatgaattttttcagcaacgcttgcttccactg
tatcaatccatttcccatttcaaacaacaatggctgagcaatgaacaagcgttgtttgac
ttgttggaagaaaataaatctagccaaaaaaactaccgcacttcgtgggttgaaagtcgg
tttaacaaaatgcgtcaatgggcgaataaccccaatgattttgcgttacccgatgttttt
gagcatttcaccactgctaaaattattgagaaaaccaaagcggggagtacgccgctgcaa
cattttctttttgaacaggcggaagccctcgctcaacagcaggaatgctcaacgctcagc
ttgccactggtgctgtatcattgcattacaggcattcggcagaagctcattcactacaaa
caacagcacgttgaaaaaggctttgatgatttattacgtctggtgcgtgatggattgtat
gcggaaaatggacaagaattagccacactgatccgcaatcaatatccctttgcgatgatt
gatgaatttcaggatacggacgcacagcaatatcaaattttctcgaaaatttatattgaa
aatgccccgcaacagtcgggctttattatgattggcgaccctaagcagtctatttataaa
ttccgtggtgcggatattttcacctattttaaagcctcgcaacaggcggatcaccgtttt
actttgcaagaaaactggcgttctaccgcagaattaattgaatgcgtcaatggcattttt
aactttagctcgccaccgccctttttatttgatgatattcaattttcccccgtcaaagcg
ggaaaagccttgccagcgtttaatcttaacgggcaagatgagcctgcgttgagctgttat
ttgagtgaaaaaaatgatcgccaagcattcgcccaatattgtgccatttccattcaacaa
tggttaaaaagtgcggtacaaaatcaagcccatttttccgatcaaccgcttaaagcgaaa
aatatcgccgtgctagtgagaaaccgccacgaagcggaattagtcaaaactgccttgcaa
aatttaggcattgcatcggtgtatttatcggacaaaagcaacgtgtttgacagccccacc
gctcaagaaatggcattgattttgcaagcttgtttaaacccgttgaacgaacgctatatt
ttaaatgccatcgccacccgtttattccatttcaccagtgcagaaatttaccaaatcaag
caagatgaaaacgcgtgggagaatcttgttgagcaattttttgcctatcaaaaaacctgg
caacaaaaaggcattttggtgatgttacaccagctattgctcaacagtgatttaacccaa
cgcttgcttgccaatgcacaaagcgaacgcaccattacagattttctgcacctcgccgaa
ttattacaacaagccagccgtctgaatgagagtgaagcggggttattgcgttggtttgaa
aagcaaattcaaggcacagatcgccttgaagaaaccattcgcctagagagcgagcgagat
ttggtgaaaatcgttaccattcataaatctaaagggctggcttatgatttagtttggttg
ccttttatttccgctcccgcgaaaaacaaaaaaaatgcgatcagcacttattattcacca
cagcaagagaaagtgctgtgggatatggaaaatcagcaacaagatcaagtagataaagaa
accttcgcggaagaattacgcttgctctatgtggcattaacccgagccaaataccaagtg
gcgatgtgcctgccaaaaacctttgaagctagctggaatagttttttatatgtgctaacg
gagggggaaatcgggcaagaaacggcgttgaaaaagaaggattatcaagccgagccatta
ttgcgagcgttgcaacaaaaagttggcacgaatgcccttgcgttgcgagaggcgagcgaa
ctcacgccaagcgaagccattatgccaaccacagcggaacaacattttagccctgcgata
tttcgtggcaagattgaatatcattggggggtaaccagttttaccgacatcgtgcataaa
catcaacgcaataaattgcacgccttagattccgcccaagatcaaagtgcggtggaaatg
tttaaggtttttgatcaaagccgagattatgattttaatcttcccgccgaaacctcaatg
gcagaaaatgcgatcttgctagaagaaaatccactgcaagatagcccttatccgcaaggt
ttttctccttttgagttaccaagtggcgtgcgagtaggcacgattttgcaccgctattta
gaaaaaaacaccgctcaatcggcgatagaagaagagaacttacaaaaactttgcaagcag
ttgcaacttgatgaacaatggatttcaccgctgaaacaatggtttgaggcgatttatcac
agcccattattagcgggggaaagcctcagcttggcacaaattcaaccgcaagattgctta
aaagaaatgcagttttatttgaaattgagcaaaaattttgacgcggcgggctttaatcga
gccttgtcccaatatcacccttacccaagccaagccctgatttttgaacgcttgaaagga
atgttacgcgggtttatcgacctcgtttttcgtcacaatggcaaatattatattctggac
tacaaatcgaatttacttggcaatcaagcggaaaattatcagcccgaccgcttgcccgct
gtgatgcaacaaggcttttatgattggcaatatttgctttatagcctcgccttgcaccgc
tatcttcgccaacgtgatccccattatcagtatgaacgggattttggcggcgtgatctat
acatttttgcgtggaatgaacgggcaagatcaaacaggcgtgttttttgataagcccgat
tggcggctcattcaagctttagaggaattattttaa
DBGET
integrated database retrieval system
