Candidatus Puniceispirillum marinum: SAR116_0424
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Entry
SAR116_0424 CDS
T01207
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAR116_0424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_0424
Enzymes [BR:
apb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SAR116_0424
DNA repair and recombination proteins [BR:
apb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SAR116_0424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADE38667
UniProt:
D5BQV3
LinkDB
All DBs
Position
450905..451675
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AA seq
256 aa
AA seq
DB search
MRIASWNVNSAKARLDHITGWLKADNADILMMQEIKSQDENFPHDAFTDLGWHIAVHGQK
SYNGVAIASRFPIDDVMNGLPGDDADEQARYIEATINGVRIGNIYLPNGNPAPGPKFDYK
LSWMARLYDRAVELLATEMPVVLGGDYNVLPQDVDCYDPAAWVGDALTHDDSRAAFFKIL
HAGYMDALRALHPSGVHYTYWDYQAGAWQRDNGLRIDHLLLSPEAGDRLTDVGIDRAPRG
LEKPSDHTPIWCQLRD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattgcaagctggaacgtcaattctgccaaggctcggcttgaccatatcacgggc
tggctaaaggctgataatgctgacattttaatgatgcaggaaatcaagtctcaggacgaa
aactttccgcatgatgcttttaccgatttaggttggcatatcgctgttcatgggcagaaa
agctataacggcgttgccattgccagccggttccccatagatgacgtgatgaatggcttg
ccgggtgatgatgcagacgaacaggcgcgctatattgaagccaccattaacggtgttcgc
attggcaatatatatctgcccaatggtaatccggcaccaggtcctaaatttgactataaa
ttatcatggatggcacggctttatgatcgtgcggtcgaattgctagctaccgaaatgcct
gtcgttctgggcggtgattataatgttctcccacaggatgttgattgttatgatccggca
gcttgggttggtgatgccctcacacatgatgatagccgtgccgctttctttaaaatcctg
catgctggctatatggatgctttgcgagcattacatccatctggcgtgcattatacctat
tgggattatcaggcaggtgcatggcaacgcgacaatgggttacggattgaccatctcctg
ctgtcaccagaggctggtgatcggctgactgatgtcggcattgaccgggcgccccgtggg
cttgaaaagccatcggatcatacaccgatctggtgtcaattgcgtgactga
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