Alpha proteobacterium HIMB59: HIMB59_00000230
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Entry
HIMB59_00000230 CDS
T02249
Name
(GenBank) D-Ala-D-Ala ligase family protein with ligase catalytic domain,D-Ala-D-Ala ligase family protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
apc
Alpha proteobacterium HIMB59
Pathway
apc00470
D-Amino acid metabolism
apc00550
Peptidoglycan biosynthesis
apc01100
Metabolic pathways
apc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HIMB59_00000230
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HIMB59_00000230
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HIMB59_00000230
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
apc01011
]
HIMB59_00000230
Enzymes [BR:
apc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HIMB59_00000230
Peptidoglycan biosynthesis and degradation proteins [BR:
apc01011
]
Precursor biosynthesis
Amino acid ligase
HIMB59_00000230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
TTL
Ins134_P3_kin
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AFS48227
UniProt:
J9YYV0
LinkDB
All DBs
Position
complement(24284..25174)
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AA seq
296 aa
AA seq
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MSFKELKKIKIAIVAGGWSSERSVSINSGKNVFNTLKKNGYKVTFFDLKKYNLHELFKSK
PDLIFNALHGEFGEDGGISCLAKKYNTTITHSEDISSALCFNKRLLKKFLKNELNLLSPR
ELYEIKKIKFPLIAKPNADGSSKGVKIINNYKELKKLKIDQNTLIEEKIDGRELTVTVIE
DKKKVKALGVTEITFKSAHYDFKAKYTYGKSKHYLPARLSKKNYEYLLNLSEIIFKKCNC
RSIARLDFILDSKSNCFYFLELNTHPGLTSISLAPEQAQYNGINYLSLIEKIIYSS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaaagaattaaaaaaaattaaaatagcaatagttgccggagggtggtcgagc
gaaagatcagtttcaataaattcaggtaaaaatgtatttaatactttaaaaaaaaatggc
tataaagttacattttttgatttgaagaaatataatttacatgaattatttaagtccaaa
cctgatttaatatttaatgcactgcacggtgagtttggtgaagatggtggcatctcttgt
cttgcaaaaaaatataatacaaccattactcactcagaagatatttcatcagccctatgt
ttcaataaaagactacttaaaaagtttttaaaaaatgaattaaacttactctcaccgaga
gaactctatgaaattaaaaaaattaaattcccattaatcgcaaaaccgaatgcagatggt
tcatctaagggtgttaaaattatcaataattataaagagctaaaaaaattaaagattgat
caaaatactttgattgaagaaaaaatagatggaagagaactaactgttacggtaatagaa
gacaaaaaaaaggttaaagctttaggagtgacagaaattacttttaaaagtgctcactat
gattttaaagctaaatacacatatggaaaaagtaaacactatcttccagcaaggttatct
aaaaaaaattatgagtatttattaaatttatctgagataatttttaagaaatgtaattgt
cgttcaatagcaagattagattttattttagactcaaaaagcaattgtttttattttcta
gagcttaatactcatccgggattaacttcgatttcactcgcaccagaacaggctcaatat
aatggaataaactacttatcacttattgaaaaaataatttactcatcatga
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