Anas platyrhynchos (mallard): 101793172
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Entry
101793172 CDS
T02816
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apla04121
]
101793172 (PDZRN3)
Enzymes [BR:
apla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101793172 (PDZRN3)
Ubiquitin system [BR:
apla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
101793172 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
101793172
NCBI-ProteinID:
XP_005025753
Ensembl:
ENSAPLG00000014073
EnsemblRapid:
ENSAPLG00030003762
LinkDB
All DBs
Position
13:3883549..4013159
Genome browser
AA seq
779 aa
AA seq
DB search
MGCSLCTLQKQEEQYKLLYEVCQVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTK
IFTPHESQLVDVGTQTDITFEHIMALSKMGSPTPPVSVLDPYLLPEDHPSVHEYYDPNDY
MGGIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDIGIYVSEIDPNSIAAKDG
RLREGDRIIQINGIEVQNREEAVALLSSEESKNISLLVARPEIQLDEGWMDDDRNDFLDD
LHMDMLEEQHHQAMQFTASMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDE
SSEQENNADDHTTSSNTLGSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDE
CERFRELLELKCQVKSASPYSLYYHNSTLDMSKSDQESVDKELEMLNEELRNIELECLNI
VRAHKMQQLKDQYREPWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGE
SCRSTPLTLEISPDNSLRRTAEGVNCQGNEGAVAYNVSQKNLLAGSESHESSTGKCHSSA
KDPDLGKQLESKERKPSDGSKSPTHGQKPSGSYVSPYHHSPYKHAHIPAHAQHYQSYMQL
IQQKSAVEYAQSQMSLVSMCKDFNASQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERA
IKIKEERSGMTTDDDAISEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQ
GAEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgcactctacagaagcaagaagaacagtacaaattactgtatgaa
gtttgtcaggtcaatgggaaggatttatctaaggcaacacatgagcaggcagtggaagcc
ttcaaaaccgccaaggagcccatcgtggtgcaggtcctgaggagaaccccacgcaccaag
atcttcactcctcatgagtcccagctggtcgatgtgggcacgcagaccgatatcactttt
gaacacatcatggctctaagcaagatgggctcacctacgccaccagtctctgtgctggac
ccgtacctcctacctgaagaccatccatcagtgcacgagtactatgatccaaatgactac
atgggaggaattcatcaagaaatggaccgagatgagttagaactggaggaagtagatttg
catagagtgaacagccaggacaagcttggccttactgtatgttaccgaacagacgatgag
gatgacattggtatttatgtgagtgagattgatcccaacagtattgctgcaaaagacggt
cggctccgagaaggggatcgcattattcaaatcaatggcatagaggtacagaaccgagaa
gaagctgtggcacttctcagcagtgaagagagcaagaatatctccttgctggttgcaaga
ccagaaattcagctggatgaaggatggatggatgatgacagaaatgattttctggatgac
ttgcacatggacatgttagaggagcagcaccaccaggcaatgcaatttactgccagcatg
ctccagcagaagaagcacgaggaagatggcggtaccacagacacagccaccattttatct
aaccagcacgagaaggacagcggcgtggggcgcacagacgacagcactcggaacgatgag
agctctgagcaggaaaacaatgccgatgatcacaccacttcctccaacactttagggagc
cagaagaagctgacttacagtcacgacaccctcggaagcggcgatatgcagttcagcaac
gagtcgttcatctcagccgactgcaccgacgtcgacttccttggcatccccgtagacgaa
tgtgagcgattccgggaactgctggaactgaagtgccaggtgaagtctgccagcccttac
agcctgtactaccataacagcactctggatatgagcaaaagcgaccaagaaagcgttgac
aaagagctggagatgctgaatgaggagctgcgcaatatcgagctggagtgcctgaatatt
gtgagagctcataaaatgcagcagctgaaagatcagtaccgggagccctggatgctgcat
aacagtggcttccgcaactacaacaccagcatcgacgttcgcaggcatgagctctcagac
attacagagctccctgagaagtctgacaaggatagctcgagcgcatacaacacaggggaa
agctgccggagcacaccgctcacgctggagatttcccctgacaattcgctgcgcagaact
gcggaaggcgtcaactgtcaaggtaacgagggggcagtggcatacaacgtctcccaaaag
aatttactggctggctcagaaagccacgaatccagcactggtaaatgccattcctctgct
aaagatcccgaccttggcaagcagctggaaagcaaggagagaaaacccagtgatggaagc
aaaagccctacacatggtcaaaaaccttctggctcctacgtctccccgtaccatcactcc
ccatataagcatgctcatattcctgcccatgcacagcactaccagagctacatgcagctg
atccaacagaaatcagcggtggagtacgcgcagagccaaatgagcctggtgagtatgtgt
aaagactttaacgcgagccaaagcgagccaaggatggagtggaaagtcaaagtgcgaagc
gacgggacgcggtacatcacaaagaggccggtcagggaccggctgctgagagaacgtgcc
atcaagatcaaggaagagcgcagcggaatgactaccgatgacgatgccataagtgaaatg
aagatgggccggtactggagtaaggaagagcgaaagcagcatttagtgaaggcgaaggag
cagaggaggaggcgtgagttcatgatgcagagcaggctagattgtttgaaggaacagcaa
ggtgcagaagaaaagaaagagatgaatatcattgaactgagccacaaaaaaatgatgaag
aaaagaaataaaaaaatatttgacaattggatgacaatccaggaactccttacccacgga
acaaagtcaccggacggcacacgcgtgtacaattccttcctgtcagtgactactgtataa
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