Anas platyrhynchos (mallard): 101796653
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Entry
101796653 CDS
T02816
Symbol
COL17A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
apla
Anas platyrhynchos (mallard)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
101796653
NCBI-ProteinID:
XP_027315684
EnsemblRapid:
ENSAPLG00030009159
LinkDB
All DBs
Position
6:complement(25215039..25251380)
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AA seq
1506 aa
AA seq
DB search
MDSVTKKTRQDGSEVTERLITETVTTRLTSLPPKGGSSSGLKTSSHTGGSGVEKRSYTHS
SSYVTSSGSGRLNSSSSSGYRQAQSPSSTLTKSPGSTFERKTYVSRHATYEGSSSANSSP
EFPRKEFASASTRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRSP
SSTLPIPKKAVVETKMVTESSQSVSGTYDTTILNTALPSYNWSSTLPAGSSLGGYHNSMA
QSSSLINAMSHSTGSVFGVPNNLAPTNHTLNTGLSTSSTVFGVQNNLSPNSSTLTQNASA
ASTAYGMKNTSQSNTMASTGVSASAGGTVLSSQGDDILRKDCKFLLLEKDNAPAKKEMEL
LIMTKDSGKVFSASNTGLNGGSFAEDTLKKEKQGFSSSYTTDTGLKSDANGGLKSVPTRD
KATYAEIRNGDVGGAVGSAPSWCPCGSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEVR
KLKSRVDDLEKINHSFLAVNHGSPSIAKDVSRVDYLQGVAPSSTFPLENEESVWLMVKSR
LNKEIERGYFRGERGEPGMKGDMGMQGPKGDRGLPGVPGIPGPIGHQGPEGPKGQKGSMG
DPGMEGPMGQRGREGLPGPRGEPGPPGFGEKGDRGAVGEPGPPGPPGPPGSAGLKGLTGS
PGPQGPPGPPGLQGFRGEAGLPGAKGEKGAAGAPGPKGDQGEKGSRGMTGEQGPRGIPGP
PGEPGAKGPPGQAGRDGKPGQKGEPGLPGPPGYAGEPGLTGPQGPPGLPGNPGRPGTKGE
PGAPGKVISAEGSSTIALPGPPGPPGPPGPTGPPGVPGPVGPAGLPGQQGPRGEKGSPGE
AVVETIRTEVSSLASQMMADLQGRAGPPGPPGPPGESVQGPPGPRGPPGEGLPGPPGPPG
RPGSSISTSETFLSGPPGPPGPPGPKGDQGEPGPRGFTGEPGEPGLPGIFSHGGTVTMQG
PPGPPGPPGPKGDAGVPGAPGIPGTSRGGSRQIQGPPGPPGPPGPPGPGGSSSQEIQQYV
TDYLKSDNVRHYLTGAQGPPGPPGPPGIITTADGNSLDYAELAARVMSYMTSSSDRYQSY
VSSVSSTSVLYQELLDMLQREEIRQYLIGPQGPPGPPGPGGDGMALSLDYDELTRRFISY
LSSSGMNIGLPGPPGPPGTPGISYSELTAYLRNSEFSGLVGPQGPPGPPGIPGSPGASLE
DISAYLQNVGYSSISGVQGPPGPPGPPGPPGFSGTGLLSYADITNSDEFRSELIQYLKSD
EVRSYISGPPGPPGPRGPPGPKGDSGLVAGSLASVYGESLSSERLHGGSLGAEGSHGASL
GAGSSYSSSMSSMSSYSASMGSEGSYGASRGGDGSFDGLLAAEEAHRRSAGSGRSYSNSF
SGSLDYNELARHLSENLQSRGILQDLMSYTGQGPPGPPGPPGPPGISRVFAAYGNVTEDL
MDFFRAHGTVQGPPGEKGERGYPGPKGDPGPMGPPGRHGQRGPKGEKGEKGEQVYVGRRK
RRSVGV
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtaacgaagaaaacgaggcaagatggctcagaagttacagaaagacttatt
acagagacagtaacgacaaggctgacttccttaccacccaaaggagggagcagcagtggg
ctcaaaacatcatcccacactggagggagtggagtggaaaagaggtcttacacccatagc
agcagctatgtgacttcaagtggaagtggtagactgaattcatcatcgtcatctggctac
agacaagcacagtctcccagctcaactctcaccaaatcacctggttcaacgtttgaaaga
aaaacttatgtcagccgccatgcaacatatgaagggagctccagtgctaactcttctcca
gagttccccagaaaagagtttgcatctgcttccacacgagggagaagccaaagtcgagag
agtgaaatacgagtccggcttcagagtgcatctccctctggcagatggacagagctggat
gatgtaaaacgtttgctgaaagggagtcgatcagccagctgcagccctactcgatcacca
tcaagcaccctcccaataccgaaaaaagctgtggtggagacaaagatggttactgagagc
tctcagtcagtgtcggggacatatgatacaaccatactgaatactgccctcccttcatac
aactggtcctcaactctgcctgctgggtcttcccttggcggataccacaacagcatggcc
cagagctcgtccttgatcaatgctatgtctcactctacaggatcagtttttggtgttcca
aataacctggctcccaccaatcatactctgaacacaggcctgagcacttcctcaacagtg
tttggagttcaaaacaacctgtcaccaaactcttcaaccctgacccagaatgcctctgca
gcctccacagcatatgggatgaagaacacttctcagagcaacaccatggctagtactggt
gtgtctgcctcagcaggaggaactgttttgagctcccagggggatgacattctgcgcaaa
gactgcaagttcctgctgctggagaaggacaatgccccagcaaagaaggagatggagctc
ttgatcatgacaaaggatagtggcaaagtctttagtgcctcgaacaccgggcttaatgga
ggatcctttgcagaagacacattgaagaaagagaagcaaggattttcttcttcttacact
acagatacgggcctcaaatcagatgcaaatggaggactgaaatcagtaccaacaagggac
aaagcaacatatgcagaaatacgaaatggcgatgtggggggtgcagttggatcagcacca
tcttggtgtccctgtggttcctgctgtagctggtggaaatggctcctgggtttgcttctg
gcctggttgcttctcctcgggttactgtttggactcattgctctggcggaagaagtgaga
aagctgaaatctcgtgtggacgacctggaaaaaatcaatcacagcttcctggcagttaac
cacgggagtccaagcatagcaaaagatgtttcaagagtagactatcttcaaggtgtggca
ccctcttcaaccttccctcttgaaaatgaagaatcagtttggttgatggtgaagagcaga
ctgaacaaggaaatagaacgaggctacttccgaggggagagaggagaacctggtatgaaa
ggtgacatgggaatgcagggtcctaaaggagatcgaggacttcctggtgtcccaggcatt
cctggtccaattgggcaccaagggccagaaggaccaaagggacagaaagggagcatgggt
gatcctggtatggagggtcccatgggacaaagaggtcgagaagggttaccaggacctcga
ggagagcctggaccacctggatttggagaaaaaggagacagaggtgctgttggtgagcca
gggcctccagggccacctggtcccccaggttctgctggccttaaaggtctgacgggttct
ccaggaccccaaggccctccaggtcctcctggcctacaaggatttagaggagaagcaggt
ctcccaggtgctaaaggtgagaaaggagctgctggagcccctggacccaaaggtgaccag
ggtgagaagggttctcgtggaatgacaggtgaacaaggcccaagaggtatacctggtcct
ccaggagagccaggggccaaaggaccaccaggacaagctggccgtgatgggaagccaggt
caaaaaggtgaaccgggtcttccaggacctcctggatatgcaggagagccaggtctcaca
ggaccccaaggacctccaggacttccagggaaccccggcagaccagggactaaaggagaa
cctggagctccaggcaaagtcatcagtgctgagggttcatcgactattgctctcccaggc
cccccaggcccacctggcccacctggccccactggaccccctggtgttccaggtcctgtt
gggccagctggtctccctggacagcaaggtccacggggtgagaagggatccccaggtgaa
gctgtggtagaaactatcaggacggaagtctcatcactggcatctcagatgatggcagat
ttacaagggcgagcaggaccaccaggtccccctggaccaccaggtgaatctgtgcaggga
ccccccggacctcgtggcccaccaggagagggattgccaggacctccaggcccaccaggg
agaccaggatcttctatatccacctcagaaacattcctctcaggcccaccgggtccacca
ggtccaccaggcccgaagggagaccaaggcgaaccaggtccacgaggattcacaggagaa
ccgggtgaacctggccttccaggaatcttctcccatggtggtacagtcaccatgcaggga
cctccaggcccaccaggtccaccaggacccaaaggtgatgcaggtgtcccaggcgctcct
ggcatcccaggaacatctcgaggtggatccagacaaattcagggacccccaggtcctcct
ggcccacctggtcctcctggcccaggcggaagttcatctcaagagatccagcagtatgtc
actgactacctgaaaagtgacaacgtaaggcattatttgaccggtgcccaaggcccacca
ggccctccaggcccacccgggatcatcaccactgcagatgggaatagcttggattatgcg
gagctggctgcgcgggttatgagctatatgacaagctcttcagatcgttatcagtcatat
gtcagttcagtgtcatccacatcagttttgtatcaagaacttttggacatgctgcagaga
gaagagattcgtcagtatctgattggaccccagggcccaccggggcctcccggaccagga
ggagatggaatggctctgtcactggattatgatgagttgaccaggcggtttatcagctac
ttgtcaagttctgggatgaacattgggctccctggaccacctgggcctccggggacacct
ggcatatcatacagtgagctaacagcatacctgcgaaactctgaattcagtggtctcgtt
ggtccccaagggcctccagggcctccagggatccctggatcacccggcgcctctctggag
gacatctctgcttacctacaaaatgtgggatactcttccatctccggagtgcagggccca
cctggcccgccgggccctccagggccaccaggcttctcgggaaccgggctcctgtcctac
gcagacatcaccaacagcgacgagttccggagcgagctgatccagtacctgaagagtgat
gaagttcgaagctacatctcggggccacccgggccccctgggccgcggggaccaccagga
cccaaaggggacagcggtttggtggctgggtctctggcgtcagtgtatggcgagtcgctg
tcttctgagcggttgcacggaggatcccttggtgctgagggctcccacggggcatcgctg
ggcgcaggcagctcttacagcagctccatgagcagcatgtcatcgtacagtgcctccatg
ggcagcgagggctcctacggtgcctccaggggtggtgatggctcttttgatggcttgctg
gcagctgaggaggcccacaggagatcagcaggttccggcagatcctacagcaactccttc
tctgggtccctggattacaacgagctggcgcgccacctgtcagagaacctgcagagccga
ggtatcctccaggacctgatgtcttacactggacaggggccaccaggtcccccaggtcct
cctggtccccctggaatcagcagggtctttgcagcctatggcaatgtcaccgaggatctt
atggacttcttcagagcacatggaactgtccaggggcctcctggtgagaagggcgagcgg
ggttaccccggacccaaaggtgaccccggaccgatgggcccaccgggacgccatgggcaa
agaggacccaaaggagagaaaggcgagaaaggtgaacaagtgtacgttggcagaagaaaa
agaagaagcgttggggtttaa
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integrated database retrieval system
