Anas platyrhynchos (mallard): 101797881
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Entry
101797881 CDS
T02816
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101797881 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apla03400
]
101797881 (LIG3)
Enzymes [BR:
apla01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101797881 (LIG3)
DNA repair and recombination proteins [BR:
apla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
101797881 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
101797881
NCBI-ProteinID:
XP_027327577
Ensembl:
ENSAPLG00000008964
EnsemblRapid:
ENSAPLG00030032585
LinkDB
All DBs
Position
20:6610265..6625534
Genome browser
AA seq
980 aa
AA seq
DB search
MPVGGRALAQAARLLARGAALGVCRPPLSSAGSPRGWLAASAASGGLPGAERGGGARGGI
PEVTAGPAGGWPAPGGGMAEQRYCVDYAKRGTAGCKKCKEKLVKGTVRIGKIVPNPFTES
GGEMKEWYHVRCMFEKLEKARATTKKIEDITDLEGWEELQDEEKELIQKHIAEATSKAAS
TPKKKATVQAKLTPTGQITSPSKDPLAAVNPKKFSGFTAKPKNSEDVPANSSHKSSLSAK
KSDPKHKDCLLREFRKLCAMVADKPSYNVKTQIIQDFLQKGTGGDGFHGDVYLTIKLLLP
GVIKIVYNLNDKQIVKLFSRIFNCSQEEMIRDLEQGDVSETIRLFFEQSKSCPPAAKSLL
TIQEVDEFLIQLSKLTKEDDQQSVLHDITRRCTGNDLKCIIRLIKHDLKMNAGAKHVLDA
LDPNAYEAFKASRNLQDVVERVLKNQQEAEKMPGLKRTLSVQASLMTPVQPMLAEACKSI
EYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPQAFPGG
HSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDISLMDRPLRE
RRKFLHDNMVEIPNRILFSEMKHVTKASDLADMITRVIREGLEGLVLKDIKGNYEPGKRH
WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPKSEKWCTVTKCAGG
HDDATLARLQTELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAPVWEITGAEFSKA
EAHTADGISIRFPRCTRIRDDKDWKTATNLPQLKELYQLSKEKADFSVVAGEEEESTAGS
SGENEGNSRSSTPHKTTKTPPSKSPAKAKKPEGTKAITESPQKPEEKRGEKRKASEMDDN
GKKTLLDIFTGVKLYLSPSVKDFNKIRRYFIAYDGDLVPEFDTASATHVIGDIDENPGAK
RVSPKWIWECIRKRRLVAPC
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttggcggcagggctctggcccaggctgcccggctgctcgctcgcggcgcggcc
ctcggcgtctgccggccgccgctctcctcagccggcagccctcggggctggttagcggcg
agcgcggcctccggaggcctcccgggggccgagaggggcggcggggcccgaggggggatc
ccggaggtgaccgcggggccggcggggggctggccggccccggggggggggatggcggag
cagcggtactgcgtggactacgccaagcgcggcacggccggctgcaagaagtgcaaggag
aagctggtgaagggcacggtgcgcatcgggaagatcgtgcccaaccccttcaccgagtcc
ggcggggagatgaaggagtggtaccacgtcaggtgcatgttcgagaagctggagaaggcc
cgcgccaccaccaagaagatcgaggacatcacggacctggagggctgggaggagctgcag
gacgaggagaaggagctgatccagaagcacatcgcagaagctacgtccaaggctgcaagt
acgccgaagaaaaaagcaacagtccaagctaagctcactcccacaggacaaataaccagt
ccctcgaaggacccattagctgctgtcaatccgaagaagttctctggcttcacagccaag
ccaaagaattcagaagatgtccccgcaaactcttcccacaagtctagcctgtctgcaaaa
aaaagtgatccgaagcacaaggactgcttgctgcgagagttcaggaagctctgcgccatg
gttgctgacaagcctagctacaatgtgaaaacgcagatcattcaggacttcctgcagaag
ggaactggaggagatggttttcatggtgacgtgtacctgaccattaagctgctgttacca
ggcgtcattaaaattgtttacaacttgaacgataagcagatagtaaagctgtttagtagg
atttttaactgcagccaagaggaaatgatccgggacctggagcagggagatgtctctgag
accatacgcctcttctttgaacagagcaaatcttgtcctccagcagctaaaagtctcctg
actatccaagaggtagatgagttcctaatccagctatcaaagcttactaaggaagatgac
cagcaaagtgtgctgcacgatatcactcgcagatgtactggcaacgacctgaaatgcatc
atcaggctaattaagcatgatctgaaaatgaatgctggtgcaaagcatgtgttggatgct
ttggatccaaatgcttacgaggcattcaaagcatcacgcaacctccaggatgtggtagag
cgagtcctgaagaaccagcaggaggccgagaagatgccagggctgaagcgaaccctcagc
gtgcaggcctccctgatgaccccagtgcagcccatgctggctgaagcctgcaagtcaatt
gagtatgccatgaagaagtgcccaaatggcatgtatgcggagatcaaatatgatggtgag
cgagtgcaggtccataaaaatggagatcacttcagctacttcagccggagcctcaaacct
gtccttcctcacaaagtagcacattttaaggacttcatcccccaggctttccctggcggg
cacagtatgatcctggattcggaagttcttctaattgataacaaaactggcaagccactt
ccttttgggactcttggtgtgcataagaaagctgctttccaagacgccaatgtttgcttg
tttgtgtttgactgcatctatttcaatgacatcagcctgatggacaggcccctgcgcgag
cgtcgcaagtttctacatgataacatggttgaaatccccaaccggatcctcttctcagag
atgaagcatgtcacaaaagcttcggatctggcagatatgatcacccgagtcatccgtgaa
ggactggaaggactggtgttgaaagatataaagggtaattatgaaccaggaaaacggcac
tggctgaaagtgaaaaaggactacctaaacgagggtgcaatggctgacacagcagacttg
gtggtgctgggagctttctatgggcaaggcagtaaaggtgggatgatgtccattttcctc
atgggctgctatgatcccaagagtgagaagtggtgtacagtgaccaagtgtgctggtggc
catgacgatgccaccttggcccgtctgcaaacagagctggatatggtgaagatcagcaag
gatcccagtaaaattccaagctggctaaaaattaacaaaatctactacccagacttcatt
gtcccagatccaaagaaagccccagtatgggagatcacaggagctgaattctctaaagca
gaagcccacactgcagatgggatctctattcgtttccctcgctgcacccgcattcgagat
gataaggactggaagacagccaccaacctcccgcagcttaaggagctgtaccaactctcc
aaagaaaaggctgacttcagtgttgttgctggggaggaagaagagtccacggctggcagc
agtggagagaatgagggaaattccaggtcttccacgccacacaagactactaaaactccc
ccaagcaagtcacctgcaaaagccaagaagccagaaggcactaaagcaatcactgaatcc
cctcaaaagccagaggagaaacgaggagagaagcgaaaagcatctgagatggatgacaac
ggaaagaagacactgctggacatattcactggtgtgaagctgtacctatcgccctcggtg
aaggatttcaacaaaatccgtcgctacttcatagcctacgatggtgatcttgtgccagag
tttgacacagcctcagcaacgcatgttataggggacattgatgagaatcctggtgctaaa
cgtgtatctcccaaatggatctgggaatgcatccgcaaacggagactggtagccccatgc
tag
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integrated database retrieval system