KEGG   Anas platyrhynchos (mallard): 101797881
Entry
101797881         CDS       T02816                                 
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101797881 (LIG3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apla03400]
    101797881 (LIG3)
Enzymes [BR:apla01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101797881 (LIG3)
DNA repair and recombination proteins [BR:apla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     101797881 (LIG3)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase Synaptonemal_3 mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 101797881
NCBI-ProteinID: XP_027327577
Ensembl: ENSAPLG00000008964
EnsemblRapid: ENSAPLG00030032585
LinkDB
Position
20:6610265..6625534
AA seq 980 aa
MPVGGRALAQAARLLARGAALGVCRPPLSSAGSPRGWLAASAASGGLPGAERGGGARGGI
PEVTAGPAGGWPAPGGGMAEQRYCVDYAKRGTAGCKKCKEKLVKGTVRIGKIVPNPFTES
GGEMKEWYHVRCMFEKLEKARATTKKIEDITDLEGWEELQDEEKELIQKHIAEATSKAAS
TPKKKATVQAKLTPTGQITSPSKDPLAAVNPKKFSGFTAKPKNSEDVPANSSHKSSLSAK
KSDPKHKDCLLREFRKLCAMVADKPSYNVKTQIIQDFLQKGTGGDGFHGDVYLTIKLLLP
GVIKIVYNLNDKQIVKLFSRIFNCSQEEMIRDLEQGDVSETIRLFFEQSKSCPPAAKSLL
TIQEVDEFLIQLSKLTKEDDQQSVLHDITRRCTGNDLKCIIRLIKHDLKMNAGAKHVLDA
LDPNAYEAFKASRNLQDVVERVLKNQQEAEKMPGLKRTLSVQASLMTPVQPMLAEACKSI
EYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPQAFPGG
HSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDISLMDRPLRE
RRKFLHDNMVEIPNRILFSEMKHVTKASDLADMITRVIREGLEGLVLKDIKGNYEPGKRH
WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPKSEKWCTVTKCAGG
HDDATLARLQTELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAPVWEITGAEFSKA
EAHTADGISIRFPRCTRIRDDKDWKTATNLPQLKELYQLSKEKADFSVVAGEEEESTAGS
SGENEGNSRSSTPHKTTKTPPSKSPAKAKKPEGTKAITESPQKPEEKRGEKRKASEMDDN
GKKTLLDIFTGVKLYLSPSVKDFNKIRRYFIAYDGDLVPEFDTASATHVIGDIDENPGAK
RVSPKWIWECIRKRRLVAPC
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgcccgttggcggcagggctctggcccaggctgcccggctgctcgctcgcggcgcggcc
ctcggcgtctgccggccgccgctctcctcagccggcagccctcggggctggttagcggcg
agcgcggcctccggaggcctcccgggggccgagaggggcggcggggcccgaggggggatc
ccggaggtgaccgcggggccggcggggggctggccggccccggggggggggatggcggag
cagcggtactgcgtggactacgccaagcgcggcacggccggctgcaagaagtgcaaggag
aagctggtgaagggcacggtgcgcatcgggaagatcgtgcccaaccccttcaccgagtcc
ggcggggagatgaaggagtggtaccacgtcaggtgcatgttcgagaagctggagaaggcc
cgcgccaccaccaagaagatcgaggacatcacggacctggagggctgggaggagctgcag
gacgaggagaaggagctgatccagaagcacatcgcagaagctacgtccaaggctgcaagt
acgccgaagaaaaaagcaacagtccaagctaagctcactcccacaggacaaataaccagt
ccctcgaaggacccattagctgctgtcaatccgaagaagttctctggcttcacagccaag
ccaaagaattcagaagatgtccccgcaaactcttcccacaagtctagcctgtctgcaaaa
aaaagtgatccgaagcacaaggactgcttgctgcgagagttcaggaagctctgcgccatg
gttgctgacaagcctagctacaatgtgaaaacgcagatcattcaggacttcctgcagaag
ggaactggaggagatggttttcatggtgacgtgtacctgaccattaagctgctgttacca
ggcgtcattaaaattgtttacaacttgaacgataagcagatagtaaagctgtttagtagg
atttttaactgcagccaagaggaaatgatccgggacctggagcagggagatgtctctgag
accatacgcctcttctttgaacagagcaaatcttgtcctccagcagctaaaagtctcctg
actatccaagaggtagatgagttcctaatccagctatcaaagcttactaaggaagatgac
cagcaaagtgtgctgcacgatatcactcgcagatgtactggcaacgacctgaaatgcatc
atcaggctaattaagcatgatctgaaaatgaatgctggtgcaaagcatgtgttggatgct
ttggatccaaatgcttacgaggcattcaaagcatcacgcaacctccaggatgtggtagag
cgagtcctgaagaaccagcaggaggccgagaagatgccagggctgaagcgaaccctcagc
gtgcaggcctccctgatgaccccagtgcagcccatgctggctgaagcctgcaagtcaatt
gagtatgccatgaagaagtgcccaaatggcatgtatgcggagatcaaatatgatggtgag
cgagtgcaggtccataaaaatggagatcacttcagctacttcagccggagcctcaaacct
gtccttcctcacaaagtagcacattttaaggacttcatcccccaggctttccctggcggg
cacagtatgatcctggattcggaagttcttctaattgataacaaaactggcaagccactt
ccttttgggactcttggtgtgcataagaaagctgctttccaagacgccaatgtttgcttg
tttgtgtttgactgcatctatttcaatgacatcagcctgatggacaggcccctgcgcgag
cgtcgcaagtttctacatgataacatggttgaaatccccaaccggatcctcttctcagag
atgaagcatgtcacaaaagcttcggatctggcagatatgatcacccgagtcatccgtgaa
ggactggaaggactggtgttgaaagatataaagggtaattatgaaccaggaaaacggcac
tggctgaaagtgaaaaaggactacctaaacgagggtgcaatggctgacacagcagacttg
gtggtgctgggagctttctatgggcaaggcagtaaaggtgggatgatgtccattttcctc
atgggctgctatgatcccaagagtgagaagtggtgtacagtgaccaagtgtgctggtggc
catgacgatgccaccttggcccgtctgcaaacagagctggatatggtgaagatcagcaag
gatcccagtaaaattccaagctggctaaaaattaacaaaatctactacccagacttcatt
gtcccagatccaaagaaagccccagtatgggagatcacaggagctgaattctctaaagca
gaagcccacactgcagatgggatctctattcgtttccctcgctgcacccgcattcgagat
gataaggactggaagacagccaccaacctcccgcagcttaaggagctgtaccaactctcc
aaagaaaaggctgacttcagtgttgttgctggggaggaagaagagtccacggctggcagc
agtggagagaatgagggaaattccaggtcttccacgccacacaagactactaaaactccc
ccaagcaagtcacctgcaaaagccaagaagccagaaggcactaaagcaatcactgaatcc
cctcaaaagccagaggagaaacgaggagagaagcgaaaagcatctgagatggatgacaac
ggaaagaagacactgctggacatattcactggtgtgaagctgtacctatcgccctcggtg
aaggatttcaacaaaatccgtcgctacttcatagcctacgatggtgatcttgtgccagag
tttgacacagcctcagcaacgcatgttataggggacattgatgagaatcctggtgctaaa
cgtgtatctcccaaatggatctgggaatgcatccgcaaacggagactggtagccccatgc
tag

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