Alpha proteobacterium HIMB5: HIMB5_00002630
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Entry
HIMB5_00002630 CDS
T02250
Name
(GenBank) formate dehydrogenase, alpha subunit, archaeal-type
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm00630
Glyoxylate and dicarboxylate metabolism
apm00680
Methane metabolism
apm01100
Metabolic pathways
apm01120
Microbial metabolism in diverse environments
apm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HIMB5_00002630
09102 Energy metabolism
00680 Methane metabolism
HIMB5_00002630
Enzymes [BR:
apm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
HIMB5_00002630
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4
Fer4_7
Fer4_9
Fer2_4
Fer4_21
Fer4_10
Fer4_2
Fer4_6
Fer4_8
Fer4_22
Fer4_16
Fer4_18
DUF6554
TadZ-like_ARD
Motif
Other DBs
NCBI-ProteinID:
AFS47032
UniProt:
J9YVK1
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All DBs
Position
complement(252581..255349)
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AA seq
922 aa
AA seq
DB search
MSSEKRKIAYIDGKPYEIGPNHTSILKFVKSYVGEKKVPTLCDDPNLAPYGACRVCSVEV
ALEKDGPTRIVASCHTPVAENQHIFTSNEALTSLRKNIVELVLTDHPMECNTCEVNNNCE
LQTVANDLGISDHRYNNPKQHKGTPRDTSHDYMRMNLDNCINCGRCVRACDEIQGSFVLT
MSGRGFESRITTDNDMLFGDSSCVSCGACAHTCPTDAISDVFQSKSAAVDKKVRTTCSYC
GVGCNLEASIKDDKVVAIDTPKQTEVNAGHTCIKGRYAFGFYDHPDRLKSPLIKRNGKFE
EASWDEAYDFIKKELDRIVKKDGPDAVAGISSARCTNEENYVFQKMIRAAIGTNSVDCCA
RICHSPTAWGMQQTFGTGAATNSTEDIFYADLFLVIGANPTNAHPVTGAKIKQQVMKGKK
LIVLDPVTTELAKLADYHIKLRPGTNVAVLNMMLHFIVKSKLYNEDFVRDRTEGFDKFLK
EIERQDVDQLAKVAGVDKQLVKEAAIAYATARNSMEFHGLGVTEHEQGSKTVMLIADLAM
ITGNIGRKGVGVNPLRGQNNVQGAADMGCQPHQGAGYFEVADKDNQKFYTEKYGAVHPTK
AGLKIPQMFEAAIKKDLKAVWIIGEDIVQTDPNSAHVIEAMNSLELLVVQEIFMSETAKL
ATVVLPGTTFLEKDGTFTNTERRIQRVNRAVPPLPGTKPDGLIVTEMMQKLGYDQPTYDA
DQVLSEIADVVPFFKGVTRERLGKLGLQWPVQEDGTDTQILHQETFKLGKGRLKNFDWKE
SSEIEANQKDYPLILTTSRVLQHYNAATMTRRTSNINIVDKDVLLIHPKDAERRDLNTGD
IGRLYSGRGEVALKVEVTDKVKEGIVFTTFHFPEHMVNMVTGHGKDEETMCAEYKVSSVE
VQKISNQFKTEVKPKDNQAEVV
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagagaaaagaaaaattgcatatatagatgggaaaccatacgaaattggtcca
aaccatacatctatattaaagtttgtaaaaagttatgttggtgaaaaaaaagttccaaca
ttatgcgatgatcctaatttagctccatacggtgcatgtagagtttgttcagttgaagta
gcattagaaaaagatggcccaactagaatagttgcttcatgtcatactcctgtagctgaa
aatcaacatatttttacaagcaatgaagcattaacaagtttaagaaaaaacattgtagaa
ttagtgcttacagatcaccctatggaatgtaatacctgtgaagttaataataattgtgaa
ttacaaactgtggctaatgaccttggtataagtgatcatagatacaataatcctaaacaa
cacaaaggcactcctagagacacttctcatgactatatgagaatgaatttagacaactgt
attaattgtggaagatgcgtaagagcctgtgatgaaattcaaggatcttttgttttaaca
atgagtggcagaggttttgagtcaagaattactactgataatgacatgttatttggtgac
tcttcttgtgtatcatgtggtgcttgtgctcacacatgcccaactgatgcaatttcagat
gtctttcaatctaaatcggctgctgtagacaaaaaagtaagaactacttgctcatactgt
ggtgttggttgtaacctagaagcatcaattaaagatgataaagttgttgcaatagataca
cctaaacaaactgaagttaatgcaggtcatacatgtataaaaggtagatatgcatttggg
ttttatgatcacccagataggttaaaatctccacttattaaaagaaatggaaaatttgaa
gaagcttcttgggatgaagcatatgactttattaaaaaagaattagatagaatagtaaaa
aaagatggcccagacgcagtagctggtatttcgtctgcaagatgtacaaatgaagaaaac
tatgttttccaaaaaatgattagagcagcgattggtacaaacagtgttgattgttgtgca
agaatttgtcactcaccaacagcttggggaatgcaacaaacttttggtactggagcggca
actaattctactgaagacattttttatgctgatttatttttagtgattggagcaaaccca
acgaatgctcatccagttactggagctaaaattaaacaacaagtaatgaaaggtaaaaaa
cttattgttttagatcctgttaccacagagttagcaaaactcgctgactaccatatcaaa
ttaagaccaggaacaaatgttgctgttttaaatatgatgttgcactttatcgttaaatca
aaactttataatgaagattttgtaagagatagaacagaaggttttgacaaattcttaaaa
gaaattgaaagacaagatgttgatcaattagcaaaagtagcaggtgttgataaacaatta
gttaaagaggctgcaatagcatatgctactgcgagaaactctatggagttccacggctta
ggtgttactgagcacgaacaaggttctaaaactgtaatgttaattgctgatcttgcaatg
atcactggtaacattggaagaaaaggagttggtgtaaatcctttaagaggtcaaaacaat
gttcaaggtgcagctgacatgggttgccaacctcatcaaggtgcgggttattttgaagtt
gctgataaagataatcaaaaattttatacagaaaaatatggtgctgttcatccaactaaa
gctggattgaaaattccacaaatgtttgaggcagcaattaaaaaagatttaaaagcagtt
tggattataggagaagatatagtgcaaacagacccaaacagtgcacatgtaatagaagca
atgaattctttagagctattagttgttcaagaaatatttatgagtgaaacagcaaaactt
gcaactgtagttttaccaggcacaacttttttagaaaaagacggaacatttacaaacact
gagagaagaatacaaagagtaaacagagctgtacctcctctacctggtacaaaaccagat
ggtttaatagtaactgaaatgatgcaaaaacttggttatgatcaaccaacttatgatgct
gatcaagttctttctgaaatagcagatgtggttcctttcttcaaaggtgtaactagagaa
agattgggtaaattaggcttacaatggcctgtacaagaagatggaaccgatacgcaaatc
cttcaccaagaaacatttaaattaggtaaaggtagattgaaaaactttgattggaaagaa
tctagtgaaattgaagctaatcaaaaagattatccattaattctgacaacaagtagagtt
ttacagcattataatgctgcaacaatgacaagaagaacaagtaatattaatatcgttgat
aaagatgttcttttaatacatccgaaagatgctgaaagaagagatttaaatactggtgat
attggaagattgtattctggaagaggagaagttgctctaaaagttgaagttacagataaa
gttaaagaaggtattgttttcacgactttccatttcccagaacacatggttaatatggtt
actggtcatggtaaggatgaagaaactatgtgtgcagaatataaggtttcttcagtagaa
gttcaaaaaatttcaaatcaatttaaaacagaagtaaaaccgaaagataaccaagctgaa
gttgtttag
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