Abrus precatorius (Indian licorice): 113846403
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Entry
113846403 CDS
T07330
Name
(RefSeq) polyadenylate-binding protein 2-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03015
mRNA surveillance pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113846403
09123 Folding, sorting and degradation
03018 RNA degradation
113846403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113846403
03041 Spliceosome [BR:
aprc03041
]
113846403
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113846403
mRNA cycle factors
Stress granule specific factors
113846403
Spliceosome [BR:
aprc03041
]
Complex C
Other components
Complex C specific factors
113846403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_occluded
RRM_5
RRM_3
Nup35_RRM
RRM_7
YflT
DUF5062
Motif
Other DBs
NCBI-GeneID:
113846403
NCBI-ProteinID:
XP_027330415
UniProt:
A0A8B8JG40
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MAQIQVQHQGPVSTPPNGVATAQNANQFVTTSLYVGDLDQNVNDSQLYDLFNQVGQVVSV
RVCRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNNKPIRIMYSHRDPSIRKSGTAN
IFIKNLDKAIDHKALHDTFSSFGHILSCKIATDTSGQSKGYGFVQFDNEESAQNAIDKLN
GMLINDKQVYVGHFLRKQDRENALNKTKFNNVYVKNLTDSITDDELKNIFGEFGTITSAV
VMREADGKSKCFGFVNFENPDDAAKAVEALNGKKFDDKEWYVGKAQKKSEREQELKGRFE
QSIKEAADKYQGVNLYLKNLDDTISDEKLKELFSEFGTITSCKVMRDPNGISRGSGFVAF
STTEEASRALGEMNGKMIAGKPLYVALAQRKEERRARLQAQFSQMRPVAITPSVAPRMPL
YPPGAPGLGQQFLYGQGPPAMIPPQAGFGYQQQLVPGMRPGGAPMPSFFVPLVQQGQQGQ
RPGGRRGAGPVQQPQQAVPMMQQQMLPRGRVYRYPPGRNMQEVPLPGVAGGMLSVPYDMG
GLPIRDAVGQPMPIQALATALANAPPEQQRTMLGEALYPLVDQLEHDAAAKVTGMLLEMD
QPEVLHLIESPDALKSKVAEAMDVLRNVAQQQANSPADQLASLSLNDNLVS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattcaggtgcagcatcagggtcccgtgtcgactcctcccaacggcgtagct
actgctcagaacgccaaccagttcgtgaccacgtcgttgtacgttggggatcttgaccag
aatgtcaacgattcccagctctacgatctgttcaaccaggttggccaagtcgtttcggtt
agggtttgcagggacttgactactcgtcgttcactcggttacggctatgttaattacagt
aaccctcaggatgcggcaagggcattggatgtgctgaatttcactccactgaacaacaaa
cctattaggatcatgtattctcaccgggatcccagtattcggaagagtggtactgctaat
atttttatcaagaatttggataaggctattgatcacaaagccttacatgatactttttct
tcttttggacacattctttcttgcaaaatagcaactgacacttctggccagtctaaaggc
tatggttttgttcagtttgacaacgaagagtctgcacagaatgcaattgacaagttgaat
ggaatgctcatcaatgataaacaggtttatgtaggtcatttcctacgaaagcaggataga
gagaatgctctcaataagacaaaattcaataatgtctatgtgaaaaacctaacggattca
atcacggatgatgagttgaagaacatttttggagagtttgggactattactagtgctgta
gtaatgagagaagctgatggtaaatcaaaatgttttggttttgtaaattttgagaaccca
gatgatgctgctaaagctgttgaggctcttaacgggaagaagtttgatgacaaggagtgg
tatgttggaaaagcccaaaaaaaatctgaacgagaacaggaactgaaaggacgatttgag
cagagcataaaggaagctgctgacaaatatcaaggtgtgaacttgtatcttaagaacttg
gatgataccatcagtgatgaaaaacttaaagaattgttctctgagtttggcactataact
tcatgcaaggttatgcgagacccaaatggaatcagtagaggatcaggatttgttgcattt
tcaacaactgaggaggcttctcgagctcttggagagatgaatggtaaaatgattgctggg
aaacctctgtatgttgcccttgcacagaggaaagaagagagaagagcaaggttgcaggca
caattttcacagatgaggcctgttgcaattacaccttctgttgcaccccgcatgccactc
taccctcctggtgctcctggtttaggacaacaatttttgtatggccaaggacctccagcc
atgattcctccacaagctggatttggttaccagcaacaactagtacctggaatgaggcct
ggtggtgctccaatgccaagcttctttgttcctcttgttcaacagggccaacaagggcag
cgccctggaggacgccgtggagcaggccctgtgcaacaaccccagcaggcagtgccaatg
atgcagcagcagatgcttccaaggggacgcgtctatcgttaccctcctggccgcaacatg
caagaagttccacttccaggagtagctggaggaatgctgtcagtcccttatgacatgggt
ggtctgccaatccgtgatgctgtgggacagccaatgcctattcaagcattggctacagcc
cttgcaaatgctcctcctgaacagcagaggactatgcttggtgaagctttatacccgctt
gtggatcagctggaacatgatgcagcagcaaaggttacaggcatgcttttggagatggat
cagcctgaagtactgcatctgattgagtcaccagatgctctcaagtcaaaagttgctgaa
gccatggatgtgttgagaaatgttgctcaacagcaagccaatagcccagccgatcaacta
gcctcactctctctaaacgacaatcttgtgtcttag
DBGET
integrated database retrieval system
