KEGG   Abrus precatorius (Indian licorice): 113857456
Entry
113857456         CDS       T07330                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
aprc  Abrus precatorius (Indian licorice)
Pathway
aprc03082  ATP-dependent chromatin remodeling
aprc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:aprc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    113857456
   03083 Polycomb repressive complex
    113857456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aprc03036]
    113857456
Enzymes [BR:aprc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     113857456
Chromosome and associated proteins [BR:aprc03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     113857456
   HDAC complexes
    Sin3A-HDAC complex
     113857456
    BRAF-HDAC complex
     113857456
    REST complex
     113857456
    SHIP complex
     113857456
    MiDAC complex
     113857456
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     113857456
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    113857456
  Chromatin remodeling factors
   NuRD complex
    113857456
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 113857456
NCBI-ProteinID: XP_027345178
UniProt: A0A8B8KPD8
LinkDB
Position
Unknown
AA seq 441 aa
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSAEYVEFLHRITPDTQHLFSNDLAKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDAKEIGEREGKFYAINVPLKDGIDDPSFTRLFKT
IISKVVETYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKRFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPENDYIKYFAPDFSLKIPNGHIYLAMCLRFIPLEN
LNSKSYLGTIKMQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERIDQHTQDKQ
IQRDDEYYEGDNDNDHQMDAT
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgcgctccaaggacagaatctcctacttctacgacggtgatgtgggtagtgtttacttt
gggccaaaccatccaatgaagcctcatcgactttgtatgactcaccatcttgttctgtcg
tatgagcttcataagaagatggagatttatcgcccacacaaggcttatcctgttgagctt
gcccagtttcattcggctgaatatgttgagtttcttcataggattacacctgacactcag
cacttgttttcaaatgacctggcaaaatataatcttggagaagactgccctgtatttgac
aacttatttgaattttgtcagatttatgctggtggaactatagatgctgcacgtcggtta
aacaatcaactctgcgatattgctataaactgggctggtggactacatcatgccaagaaa
tgtgaagcatctggattttgttacatcaatgacttggtcttagggatcttagagcttctt
aaatatcatgcccgtgttttgtatattgacatagatgtgcaccatggtgatggtgtagaa
gaagccttctacttcactgacagggtgatgactgtcagttttcacaagtatggagatatg
ttctttccgggtactggtgatgctaaggaaataggagagagagaagggaagttttatgcc
ataaatgttccactcaaggatggaatagatgaccctagcttcactcgacttttcaagact
attatttccaaagtagttgaaacatatcaacctggtgtgatagttctccagtgcggagca
gattcacttgcaggagatcgcttgggctgcttcaatctctctattgatggtcatgctgag
tgtgttaggtttgtaaagagattcaatttgcccttgctggtcactggaggtgggggatac
acaaaagaaaatgttgctcggtgttggacagttgaaacaggagttcttctggatacagag
cttccaaatgagatcccagagaatgattatattaaatattttgcaccagacttttcattg
aagattccaaatggacatatttatttagcaatgtgtctacgatttataccattggagaat
ttaaatagtaaatcatatcttggcaccatcaaaatgcaagtcttggaaaatcttcgttgc
attcaacatgctccaagtgtacaaatgcaggaggtaccacctgatttttacattcctgat
tttgatgaagacgagcagaacccggatgaacgcattgatcagcacactcaagacaagcag
atccagcgcgatgatgaatattatgaaggcgacaatgacaatgatcatcaaatggatgct
acgtga

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