Abrus precatorius (Indian licorice): 113867963
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Entry
113867963 CDS
T07330
Name
(RefSeq) general negative regulator of transcription subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113867963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113867963
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113867963
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113867963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
113867963
NCBI-ProteinID:
XP_027359289
UniProt:
A0A8B8LWL3
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPREKAKSETRDWLNNVVGELESQIENFEAELEGLSVKKGKSKPPRLTHLETSITRHKA
HIKKCEFILRLLDNDELSPEQVNDVKDFLDDYVERNQDDFEEFSDVDELYSSLPLDKVES
LEDIVTISPGLAKVAPVLSLKSSVAAPTSASASQTSEQADDTTSQDSNSDVGARTPPPKI
SIISSATTPAGNFATPVPMNVPVPNLSSAPGVASVIPGSNTVRSPLETSSAINASSPVNQ
STTMKEEEINGFPGRRPSPSLSDAALVRNISRNSLSNQATSNISLVSGNMVSSNGALGSV
PSASEITKRNILVADDRHGSNGMVQPLVSPLSNRMITPQVARANDGTTTTSVDTSNVNEA
ASVSGRVFSPSAVPGIQWRPGSPFQSQNDAGQFRARTEIAPDQREKYLQKLQQMQQQGQS
SLLNVASLAVGNHKSYSGHQQNPLLQQLNSQSSSVTSQSGVGLGVQSLALSGIASTTLSQ
PPNSVHSPSSQQLLLSVVSKDADVGNSKVEELQQQQIFPDDSGTETTSSTGIGKNFMNED
ELKSTYAADSPAGVPASLPEPAQTSRDIDLSPGQPLQLNQRTGNLGVIGRSFADLGAVVD
NFSGSITNSGGVHDQLYNLQMLEAAHRKMPESKDSERPRTYTPRHPAITPPSYPQVQAPF
INNPGFWERVGLETFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEE
PKVATDEYEQGTYVYFDFHIANDDLQHGWTFLIHLCLDVVILRCQRIKTEFTFEYNYLED
EPIV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagtcgaaagcttcagggagagattgatcgagttctcaaaaaggtgcaagaa
ggcgtcgaagtttttgatagcatctggaacaaggtttacgacacggacaatgcgaaccag
aaagagaagtttgaagctgacctgaagaaagagattaagaagcttcagaggtatagagat
cagattaagacttggattcagtccagtgagattaaagacaagaaggttagtgcttcgtat
gagcaggctctggtggatgcacgcaagcttattgagcgtgaaatggaaagattcaaagtt
tgtgagaaggagacaaagaccaaagcattttccaaagaaggcttgggtcaacagcctaaa
actgatcctagagaaaaggctaaatcagagacgagggattggttgaacaatgtggttggg
gagttggaatctcagatagaaaactttgaagctgagcttgaagggctttctgttaagaaa
ggaaagagcaagccacccagattgacacatctagagacatctattactcggcacaaggct
catataaagaaatgtgaatttatcttaaggctactggataatgatgaattaagtcctgag
caggttaatgatgtcaaagatttccttgatgactatgtagagcgtaatcaggacgatttt
gaagaattcagtgatgttgatgagctatatagttcattacctttagacaaagtggagtca
cttgaagatattgttacaatttcccctggtcttgctaaggtggcacctgtgcttagctta
aagtcttctgtggcagcaccaacatcagcatcagcatcacaaacatctgagcaagctgat
gatacaacttcccaggatagcaattctgatgttggtgcaagaactccaccacctaaaatt
agtataattagctctgctacaacaccagctgggaattttgctacccctgttcctatgaat
gttccagtgccaaacttgtcgagtgcacctggtgttgcatcagtcattcctggttcaaat
actgttcggagtcccttggagactagtagtgctataaacgcttcatctcctgtaaatcag
tctactactatgaaggaggaagagattaatggtttccctggccgaagaccatctccatcg
ctttctgatgctgcacttgtcaggaacattagtagaaacagcctatcaaatcaagcgaca
agcaacatctctcttgtttctggtaacatggtttccagcaatggtgcccttggttcggtc
ccttcagcctctgaaataactaagagaaacatattggtagctgacgatagacatggaagc
aatggcatggtgcagcctcttgtgtcccccttaagtaatagaatgatcacacctcaagtt
gcaagggccaatgatggaactacaactacctcagttgatactagtaatgtcaatgaagct
gcaagtgtgtctgggagagttttctctccttctgctgttcctggcatccaatggagacct
ggaagccccttccagagtcagaatgatgcaggtcagtttcgcgcaagaactgaaatagct
cctgatcaaagagaaaagtatttgcagaagttgcagcaaatgcagcagcaagggcaaagt
tcccttcttaatgtggcatctcttgcggtaggaaatcataagtcatattctggccaccaa
caaaatcctctattgcagcagcttaattctcaaagctcatctgttacttctcaatctggt
gtgggacttggagttcagtcactggctcttagtggtattgcttctaccacattatcacag
ccacccaactctgtccattccccatctagccaacaactgttgctgtcagttgtttcaaaa
gatgcagatgttggcaattctaaggttgaagaactgcagcaacaacagatttttcctgac
gattctgggactgaaactacttctagtactggaattggcaagaatttcatgaatgaagat
gaattgaaatccacttacgcagcagattctcccgcaggagtaccagcctctcttcctgag
cctgctcagacttctagagatattgatttgtctcctggacaacctttacagttgaatcaa
cgtactggtaaccttggagttataggaagaagttttgctgaccttggagctgttgttgac
aactttagtggatcaattactaattctggtggagtgcacgatcaattatataatctgcag
atgcttgaggcagctcaccgcaaaatgccagaatccaaggactcagagcgtccaaggacc
tatactcctagacacccagcgataactcctcctagttatcctcaagtacaggcacccttt
attaataatcctggcttttgggaaagagtaggtctcgagacgtttggcactgataccctg
ttctttgcattttattatcaacagaacacttaccaacaatatttggctgcaaaagagtta
aagaagcagtcttggagatatcaccgaaagtataacacatggtttcagcggcacgaagag
ccaaaagttgcaacagatgaatatgagcagggcacatatgtgtactttgatttccatatt
gcaaatgatgatctgcaacatgggtggacttttctgattcatctgtgccttgatgtggtt
attctcaggtgtcaaagaatcaagactgaattcacttttgaatacaattatcttgaagat
gagcctattgtctag
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