Candidatus Absconditicoccus praedator: HLG78_05230
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Entry
HLG78_05230 CDS
T07729
Name
(GenBank) lamin tail domain-containing protein
Organism
aprd
Candidatus Absconditicoccus praedator
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
LTD
Big_3_3
SWM_repeat
DUF4625
Motif
Other DBs
NCBI-ProteinID:
UFX83503
LinkDB
All DBs
Position
1094947..1102575
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AA seq
2542 aa
AA seq
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MINFLLKLLLLFVFLFYIFFPKHYVFANDIYIDSFEVSGLQGDKVKLNPGEEFNFEISAS
NNYGEISSLFGVIDFGNNFQFSITEDEVIYRGTKWSYDEFINSSDYSDDYGVNVSMEGNN
EDLYISDEFMDPDGFKLSSDASEYKSHLEAGFESDQFSVFDTKTIYANVKPYITDYYFEK
SDGSTATTQVQGGDAETVNFVVEVKDYNGCSNIEEGNVYTDFDSLGLSSEEELSFQECID
DNTAKFRKTGITTNADLGTYTFSSKDGDGVDGKIWAIDADGNQNDPEESRFDNENKNEKL
DLTVVGPGSPNVSIIDLSENIIGGPDKQSSTLDFEVDQDDGEYKISRGSDGSCEGGDVLQ
EWTSYGSGSDIDSFDIYTGDLNEGSNSIYVCAKNEHDEIGSDNTSITLDLEEVDVNISSH
RSTINEGSSDVRFSCSKDSSYQIEVGGDDNVDSGDVLDGHDFDSTSISAGDSITVDIPND
MFDSGDNDVYVFCRDEASYVGYDSVIVNKTEVPPSMSGYVNDFYDCGQNTQGLDGRDFCV
NWEHPDDLNDYDSFGSWRIYILPEGIDLNLDEHSYKANLGDKSLTSWNGTEDINNDSIGD
SFQDGGEYVAWIYIQGSGGAGKGDAGSSQPATFQADEIENPTVEKASFVDDTTLRLETDT
TLDTDTSVHSGGLIKYDYEGDTFYGQGIDSVDGQNIDIQIESLGNTAASSDNLSILTGDS
EDVGAIRSEAGGFNNLQEGLEILDKQDPDVQDFSVDTDGDYIDGEVDWYSGHADFSWWVS
EELEGGAGSTRIEFHDMNSSSQENINLTLSENLGTGENSISRDLSERLNCGTVYQTRLRA
VDLADNTGFSDWVSNIGFDNCAPSIPELHTKDVVGSEEIDFSWDESGDDDGNGSGVDSYD
LEVYEGSSCEGTPEIEENTSNTEYSTTLSDGDYSWRVRVTDNVGNVSDFSDCDDFTVDTD
VPTIDNQQIFDTEIESTNYTREGRTVQISADITNTNKENVYLDLSSLAGNGYENLRCSDA
SGDVECTETDGNFSFNFEVGFDGTVSEGTRQVEFEFANESSQNTGTQLVSTTVDNTDPDL
EADPIISPEGGETYGGDEIQIEWKSIDYGQSGRRNIQFEYATGDFQDWNEIFQASTSGPR
TWDISDFKGQNNFQLRLTAKDRSHNTAVFTGGEFTIDRTPPEIDEDQINFEIAGGNLDGQ
IFKEGDDLILNWNTGAIEGAELPDNPLNLSYSRSGGDSFSDIESGVENSGTYTWSIPDIS
SSDNVLIKLEVVDEFDNTASIDTDTFVVDNTDPDINIGDKTPPNGREINHNGFDVNGTSS
DNYMSGIYLMFQNEADEYWSSDLLSDTSEGEYIGEPTWNLICEDDEELATDESCDNFELT
DFAPKIENSQSYQLTLKAVDRAGNETITTTRNYDGDTQEPEIEISTGVHFMSGDNIYFGE
SGINLTGTATDNKSISSVELEITNDDNHYWNGDDFQGEHYAVTADIEGEQPFKDWNYEFS
PEGDTGDNFEVKAIAYDSSYKVNLTGSDTANLVLDKTPPTIEDDVFTFDTEEFYAGGDNL
EIIWNTGKIYDDFSGLADNPINLYFDDGDEFNKIASSLPNSGSYEHTLPEVDTSEAYVRI
EANDNVGNKNHRNSNEFQIDSTPPEIDRVETAGDGYGKINRLRVIFSKDVNMDSFGTGVF
SSDKGITFDKRTSINDDRFELKFDVATGTTATRPTLSWSGGVIEDLAGNKLDMDENSMQA
ENKARPVVMNAGIFDKDKDGKFDEIQIEFSEDMQEVSDENIFSLNNNLAGLSIDSVSRDD
GNNSIINISLSGQEDINTYPGNMTLDFDGNSSDYVDLADNEAKGQDNIELLDKANPILSD
GFGVFRSKEGYYTGDTIILNFSESLSGTVNTGSFQINEGEESFDILDGYIDEEDNYIYLQ
LDDTTDTDAELELSYTGYQNNEIEDKAGNKLEEIIDFSIQNEIPPKLTQAKTLDDNHNGR
LDTIYLKFSEEIDDEELSTDGLSVANYSISGVNLSGTNQVLIELDERSRADTDTTPEVYI
GSNNTIQDTFGNNAREQSVTPKDRIGPVIASARLDDGEDKLFLTFSEDVYTELGENDFMF
ENSGEPNIDTIDFTTGNDFAEIEISDYDINFGDSRISFAANQVEDEEGNKQPDKVYQNIS
ASVVINEIFYGDDEKRYIELRNLAETEIDFSDNSWKIREAGGGTLSVDDGSLTGEGYFLI
GNSEVEDILDIDLDLERNDLKLDTENDLILEDENSETVDQVKSEVWKNDKANVAIERLDS
CADGLSEECWYDAVASENFVDEETYKGTPGAENIFDDEPPEIIATPEDNFLYPHGNISLK
YEYEDSNSGIDTDSVNIEITRTFDGGNEDSANTTNKNITESSAIYDLDLDYGKYEVDFEV
SDNAGNKSSDSIVFYVDDFSFSIDTNDVDLGLVMADNKVLSDEYVTVSVETIGAGFAITH
KHDDFGIDPWDGDYGYGGCQGSSCDDIENYENKEFVSKARDINEDGSLNTHTYEIRYGVL
LDALQDAGYYSVKNDFSLGISY
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
atgataaactttcttttgaaactactattgctttttgtgtttttgttttatatttttttt
cctaaacactatgtgtttgctaatgatatttatatagatagttttgaggtttcttgattg
caatgagataaggtaaaacttaatccatgagaagagtttaattttgagatatctgcttca
aataattattgagaaatttctagtctattttgagttatagatttttgaaataattttcag
ttttctataactgaagatgaggtaatttatagatgaactaaatggtcttatgatgaattt
ataaattcctctgattattctgatgattattgagttaatgtttctatggagtgaaataac
gaagatttgtatataagtgatgaatttatggatcctgattgatttaagctttcctctgat
gcttctgaatataaaagtcatcttgaagcttgatttgaatctgatcaattttcggttttt
gatacaaaaacaatatatgcaaatgtaaaaccatatattacagattattattttgaaaaa
tctgatggttctacagcaaccactcaagttcaatgatgagatgctgaaactgtaaatttt
gtggtagaagtaaaagattataattgatgttccaatatagaggaatgaaatgtatatact
gattttgattctttgtgattatcttctgaagaagaactatctttccaagaatgtatagat
gataatactgctaaatttagaaaaacttgaataactacaaacgctgacttaggaacttat
acttttagttcaaaagattgagattgagtagatggtaaaatatgggctatagatgcagat
ggtaatcaaaatgatccagaagaatcaagatttgataatgaaaataaaaatgaaaaactt
gatcttactgtggtttgaccttgatcacctaatgttagtataatagatttatcagaaaat
attatatgatgaccagataaacaatcatcaactttggattttgaagtagatcaagatgat
ggtgaatacaaaatttctagatgaagtgattgaagttgtgaaggttgagatgttttgcag
gaatggactagttattgatcctgaagcgatattgatagttttgatatatatacttgagat
ttgaatgaatgaagtaatagtatatatgtatgtgccaaaaatgaacatgatgaaataggt
tcagataatacatctataactttagaccttgaagaagtagatgtaaatattagttcccat
agatctacaattaatgagggctcttcagatgttagattttcatgtagtaaagactcttct
tatcaaattgaggtatgaggtgatgataatgttgatagtggtgatgtattggattgacat
gattttgattcaacttcaatatcagcttgagatagtattacagtagatattccaaatgat
atgtttgattcttgagataatgatgtatatgttttttgtagagatgaagctagttatgtt
tgatatgattcagtaattgttaataaaactgaggttccaccttctatgtcttgatatgtt
aatgatttttatgattgtgggcaaaatactcaatgacttgatggtagagatttttgtgtg
aattgggaacatccagatgacttaaatgattatgatagtttttgatcttggagaatatat
attttgcctgagtgaattgatttaaacctagatgaacactcatataaagcaaatttatga
gataaatcacttactagttggaattgaactgaagatattaataatgatagtatttgagat
agttttcaagatggatgagaatatgttgcttggatatatatacaatgatcatgatgagct
ggtaaatgagatgcttgatcttctcagcctgctactttccaagcagatgaaatagaaaat
cctacagtagaaaaagcaagttttgttgatgatactactttgagacttgagactgatact
actttggatactgatacttcagttcatagtggtggtttgataaaatatgattatgaaggt
gatactttttatggacaatgaatagattcagtagatggtcaaaatattgatatccagata
gagtctttgtgaaatacggctgcaagtagtgataatttaagtatacttacttgagatagt
gaggatgtatgagctatcagatctgaggcttgatgattcaataatttacaagaatgatta
gaaatattggataaacaggatccagatgtacaagatttttcagttgatactgatggtgat
tatattgactgagaagtggattggtactctggacatgctgatttttcatggtgggttagt
gaagagttagaatgatgagcaggtagtacaagaatagagtttcatgatatgaatagtagt
tcacaagaaaatattaatttaacattgtctgaaaatctttgaacatgagaaaattctatt
tctagagatttatctgaaagacttaattgttgaactgtttatcaaacaagacttagagca
gtagacttggcagataatacttgattttctgattgggtatcaaatatatgatttgataat
tgtgctcctagtattcctgaattgcatactaaagatgtagtatgatcagaagaaattgat
ttttcttgggatgaatctggtgatgatgactgaaatggatcaggagttgatagctatgat
ttagaagtgtatgaatgatcttcttgtgaatgaactccagaaatagaagaaaatacttcc
aatactgaatattctacaactcttagtgatggtgattattcttggagagttagagttact
gataatgtgggtaatgtatcagatttttctgattgtgatgattttactgtagatactgat
gtaccaactatagataatcaacaaatttttgatactgaaatagagtctactaattataca
agagaatgaagaactgtacaaataagtgcagatattacaaatacaaacaaagaaaatgta
tatcttgatctttcttcacttgcttgaaattgatatgaaaatttaagatgttctgatgca
agttgagatgttgaatgtactgaaactgattgaaatttttcctttaattttgaagtatga
tttgattgaacagtttctgagtgaacaagacaagttgagtttgagtttgctaatgagtca
tcacagaatacatgaacacaacttgtttctactactgtagataatactgatcctgacttg
gaagcagatccaataatatctcctgaatgaggtgaaacttattgatgagatgaaattcaa
atagaatggaaatctatagattatggacaatcaggtaggagaaatattcaatttgaatat
gctacatgagattttcaagattggaatgaaatatttcaagcttctacttctggacctcgt
acttgggatatatcagactttaaatgacaaaataattttcaacttcgtttaactgccaaa
gatagatctcataatacagcagtattcacttgaggagagtttaccatagatagaactcct
cctgaaatagatgaagatcaaataaattttgagattgcttgatgaaatttggattgacaa
attttcaaagaatgagatgatttgattttgaattggaatacttgagctatagaatgagca
gaactaccagacaatcctttgaatttgtcttattctaggagttgatgagatagtttcagt
gatatagaatctggtgttgaaaatagttgaacttatacttggagtataccagatatcagt
tcatctgataatgttttgataaaattggaagtggttgatgagtttgataatactgcttct
atagatactgatacttttgtagtagataatacagatcctgatataaatatttgagataaa
actcctcctaatggtagagaaataaatcataattgatttgatgttaattgaacatcttct
gataattatatgtctggaatttatctaatgttccaaaacgaagctgatgaatattggagt
agtgatctgctatctgacacatcagaaggtgaatatatatgagaacctacttggaattta
atttgtgaagatgatgaagaattagcaacagatgaaagttgtgataattttgaacttact
gattttgcacctaagatagaaaattctcaaagttatcagcttactttgaaagcagttgat
agggcaggtaatgaaactattacaactactagaaattatgatggagatacacaagaacct
gagattgaaatctcaacttgagttcactttatgagtggagataatatatatttctgagaa
tcaggtataaatcttacttgaactgctactgataacaagtcaatttcgtctgtagagctt
gaaattacaaatgatgataatcattattggaattgagatgattttcaatgagaacattat
gcagttacagcagatatagaatgagaacagcctttcaaagattggaattatgagttttct
ccagaatgagacactggtgataattttgaagtaaaagcaatagcttatgatagttcttac
aaagtaaatcttacatgatctgatactgcaaatttggttttggataaaactcctcctact
attgaagatgatgtatttacttttgatactgaagaattttatgcaggaggggataattta
gaaattatttggaatacttgaaaaatatatgatgatttttcctgattggcagataatcct
atcaatttgtattttgatgattgagatgaatttaataaaatagcatctagtttgccaaat
agttgaagttatgaacatacattaccagaagtagatacatctgaggcatatgtgagaata
gaagcaaatgataatgttggtaacaaaaatcataggaattctaatgaattccaaatagat
agtactcctccagaaattgatagagtagaaactgcatgagactgatattgaaaaataaat
agactaagagtaattttctcaaaagatgttaatatggattcctttggtacatgagtattt
tcatctgataaaggtattacatttgataaaagaactagtataaatgatgatagatttgaa
ctaaaatttgatgtagcaactggtactactgctactagaccaactctttcttggagtgga
tgagttatagaggatttggcttgaaataaattggatatggatgaaaattctatgcaagct
gaaaataaagcaagacctgttgttatgaatgctggaatttttgataaagacaaagactga
aaatttgatgaaattcagatagagtttagtgaagatatgcaagaagtaagtgatgaaaac
atattctctttgaataacaatttagcttgattaagtattgattctgtttctagagatgat
tgaaataattcaataattaatatttctttatctggtcaagaagatataaacacatatcct
tgaaatatgaccctagattttgattgaaattcttctgattatgttgatttagcagataat
gaagctaaatgacaagataacatagaattgcttgataaggctaatcctatactttctgat
tgattttgagtttttcgttctaaagaatgatattatactggtgatactattattttgaat
tttagtgaaagcctaagttgaacagtaaatacttgaagctttcaaataaatgaatgagaa
gaaagttttgatatattagattgatatatagatgaagaagataattatatctatttacaa
ttagatgatacaactgatacagatgcagaattagagttaagttatacaggttatcaaaat
aatgaaatagaagataaagcttgaaacaaacttgaagaaattatagactttagtatccaa
aacgaaattcctccaaaacttactcaggcaaaaactttggatgacaaccataactgaaga
cttgataccatatatttgaaatttagtgaagaaatagatgatgaagaactttctactgat
tgactttctgtagctaattatagtatttcaggtgttaatttatcttgaactaatcaagtg
ttaatagaacttgatgaaagaagtagagctgacacagatactactccagaagtttatata
tgatcaaacaatactattcaagatactttctgaaacaatgctagagaacagtcagtaact
ccaaaggatagaattggacctgtgatagcaagtgcaagacttgatgatggagaagataaa
ttgtttttgacttttagtgaagatgtatatactgagcttggtgaaaatgattttatgttt
gaaaattcttgagagccaaatatagatactattgattttacaacttgaaatgattttgca
gagatagaaatatctgactatgatataaattttggagactctagaatatcttttgctgct
aatcaagtagaagatgaggaatgaaataaacagcctgacaaagtttatcaaaatatttct
gcaagtgtagttattaatgagattttttattgagatgatgaaaaaagatatatagaactt
agaaatttagctgaaactgaaatagatttctctgataattcttggaaaataagagaagct
tgaggttgaactctaagtgttgatgattgaagtttaactggtgaatgatatttcttgatt
tgaaattctgaagtagaagacattttggatattgatttagatttagaaagaaatgatcta
aaactggatactgaaaatgatttgattctagaggatgaaaatagtgaaactgtagatcaa
gtaaaatcagaagtatggaaaaatgataaagcaaatgttgctatagaaagacttgatagc
tgtgctgatggattatctgaagaatgctggtacgatgcagtagcttctgaaaattttgtg
gatgaagaaacttataaatgaactcctggagctgaaaatatctttgacgacgagccacct
gagattatagcaactccggaggacaactttttataccctcattgaaatattagtctaaaa
tatgaatatgaagacagtaattctggtattgatacagattctgtaaatattgaaattaca
agaacatttgattgatgaaatgaagactccgcaaacacaacaaataaaaatattactgaa
tcctcagctatttatgacttagatttggattattgaaaatatgaagtagactttgaagtt
agtgataatgctggtaataaatctagtgatagtatagttttctatgtagatgactttagt
tttagtatagatacaaatgatgttgatcttggattagttatggcagacaacaaagtactt
tctgatgaatatgtaacagtaagtgttgagacaatatgagcttgatttgctattactcac
aagcatgatgatttctgaatagatccttgggattgagattattgatatggaggttgtcag
ggttcttcttgtgatgatatagaaaattatgaaaataaagaatttgtaagtaaagctaga
gatataaatgaagatggtagtttgaatactcatacttatgaaattagatattgagtgctt
ttagatgctttacaagatgctggttattattctgtcaaaaatgattttagtttgggtatt
agttattaa
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