KEGG   Auxenochlorella protothecoides: F751_0246
Entry
F751_0246         CDS       T04132                                 
Name
(RefSeq) Exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F751_0246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apro03019]
    F751_0246
Messenger RNA biogenesis [BR:apro03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     F751_0246
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 23611637
NCBI-ProteinID: XP_011396943
UniProt: A0A087SEA8
LinkDB
Position
Unknown
AA seq 276 aa
MVVSLEGDAFARLYPREYYAKFVSQGMRPDGRVLTQERPISIVRDVVAGADSSALVKLGR
ATALAGIKLEVASPEDERPGEGSIIVQVELPPMCSASSRPGLVSPRAARLTEELGGLAES
GALCDLAQLTHPGGRSVWVAYCDVYVLDADGSLSDVCLLATLAALQALRLPALEPEGAGG
AAVPAPHDTPEGPAAPRALRLEPPLTPLTCGIFGGALVVDPTAEEEALMDALVCLRVNGD
GQLAGVSKLGGSGLGREHLATAHMAAMRRHLALQGP
NT seq 831 nt   +upstreamnt  +downstreamnt
atggtagtttccctggagggcgacgccttcgcccgcctctacccccgggagtactatgcc
aaattcgtctcacagggcatgcgccccgatggacgcgtcctcacccaggagcgacccatc
agcatcgtgcgggacgtcgtggccggcgcagacagctccgcgctggtgaagctgggccgt
gcgacggccctggccggcatcaagctggaggtggcgagccccgaagacgagcggcccggg
gagggcagcatcatcgtgcaggtggagctgccgcccatgtgctcggccagcagccggccc
ggcctggtcagcccgcgcgccgcgcggctgacggaggagctgggcggcctggcagagtct
ggtgcgctgtgcgacctcgcccagctcacccaccccggcggacgctcggtctgggtggcc
tactgcgacgtgtacgtgctggacgcggacggcagcctttccgacgtctgcctgctggcc
acgctcgccgccctacaggccctccgcctgccagcgctggagccggagggggcgggcggc
gcggcggtgccagcgccgcacgacacgccagaggggcccgccgcccctcgggccctgcgc
ctggagcccccgctcacccccctaacctgcggcatctttggcggcgccctggttgtggac
cccaccgccgaggaggaagccctcatggacgccctggtctgtctgcgggtgaacggcgac
ggccagcttgccggcgtgagcaagctggggggttcgggacttggcagggagcacctcgcc
acggcccacatggcggccatgcggcgacacttggcgctgcagggcccgtag

DBGET integrated database retrieval system