KEGG   Auxenochlorella protothecoides: F751_1959
Entry
F751_1959         CDS       T04132                                 
Name
(RefSeq) Poly(A) RNA polymerase protein 2
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F751_1959
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apro03019]
    F751_1959
   03016 Transfer RNA biogenesis [BR:apro03016]
    F751_1959
Enzymes [BR:apro01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     F751_1959
Messenger RNA biogenesis [BR:apro03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     F751_1959
Transfer RNA biogenesis [BR:apro03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    F751_1959
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 NIF
Other DBs
NCBI-GeneID: 23613350
NCBI-ProteinID: XP_011397968
UniProt: A0A087SH76
LinkDB
Position
Unknown
AA seq 871 aa
MRAHAWPEAVPAQLFELVLTRDHCKPASAAAIAARGGNPWDTVKPLAHHFPRLDQVLLID
DSPHKAAADEAPNMIVMPGWAGPGAGKGDSALPVLVEALLDLAATGQALAAAGKPVPDLR
RHSGAISARLAALAVPATELRAGSALEASDDASSADPASTGRRKRSKAGITSEFPEVTQA
DVDRFADMYPPQTPGVLPEWAVQAAVTLLGHVVERLWARFPPGTGIDRLNNKLDTNPQLR
VLFGTSVRRALEACMARGSLSMATLPSFGPWIALGGAAPPLDPERDVAGLFAVRRPGPFG
GHAEVAFQPGRAADPVPEEQLKEALAIFRLAVQRLLGAVHPAPPARRDAGGGQRTLTPLH
AEVLSFARQAAPTRQEVGDMKRALMSLAEVATRLWPHSQTMLFGSQATGLTLPGGDLDVV
ILGVGSELDTAGSGFSARERQQKVQLLEDLLDALLATKLLQGRVELIDARVPIIKCCMAA
AGGLHVDISLGTANGAAAARYVRAQVLAIPPLRPLCLVIKALLRQKGFNQVFTGGISSYS
LCNMVRMWVLAYLQSEGYKLGEVPGDPGEVSSELEGVFAFLTDLHCEGLHGESAGPGPPG
ASTADLGRLLWGFCNLFGYAFRYSHQAVSPARGGICKKIGPWRQDHRGWLLAVEDPQQMG
KDIGSGSYEIRAIREMFAEVADKLGESLEDLAAQRQARGCQPASPPPLLPGIVDMVAAVA
RGASGLKARRALEAQQTAKSAEAKRYRSQSPRRSYGRHRPWEEEWGKRLRSPSPPSGEQR
ERPYSGRTPYQPQRSSRHTPLPRLTPKGKAGPKPKATPQPSAAHKPTSGGKGKGTKRARA
VEAQWSNKKGQFLESRCFVRLFEEKGVQGGS
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgcgggcccatgcctggcccgaggccgtccctgcgcaactcttcgagctggtgctgacc
cgggaccactgcaagcccgccagcgcggccgccatcgcagcgcggggcggcaacccatgg
gacacggtcaagccgctggcgcaccacttcccccgcctggatcaggtgctactgatcgac
gactcgccgcacaaggcggcggcagacgaggcccccaacatgatcgtgatgcccggctgg
gccgggccgggggccggaaagggcgacagcgccctgcccgtgctcgtggaggcactgctg
gacctggctgcgactgggcaggccctggccgccgctgggaagcccgtgccggacctgagg
cggcactcgggggccatcagcgcgcgcctggcggcactggccgtccctgccactgagctc
agggcgggtagcgccctggaggcgtccgacgacgcgagctcggcggacccggcgagcaca
ggccgccgcaagcgcagcaaggccggcatcacgagcgagttccctgaggtgacccaggct
gatgtggatcgatttgcggacatgtacccgccgcaaacgcccggcgtcctgccggagtgg
gccgtgcaggcggctgtgacgctgctcggacatgtcgtagagaggctgtgggcgagattc
ccacccggcaccggcatagacagactgaacaacaagctcgacaccaacccacaacttcgc
gtactgttcggcacctctgtgcgccgggcgctggaggcctgcatggcccggggctcgctg
agcatggcgaccctgccctccttcgggccctggatcgcgctgggcggcgcggcacccccc
ctcgatccggagcgcgacgtggccggactgttcgcagtgcgcaggcccggccccttcggc
ggccacgcggaggtggcgtttcagcccgggcgggccgccgaccccgtgccggaggagcag
ctcaaggaggcgctggccatcttcaggctggcggtgcaacgcctgctgggcgccgtccat
ccggcgccacccgcccgccgggatgctggtggggggcagcggaccctcacccccctgcat
gccgaggtgctgagctttgcgcggcaggccgcccccacccggcaggaggttggagacatg
aagcgtgccctgatgagcctggcggaggtggccacccgcctgtggccccactcccagacc
atgctttttgggagtcaggccacgggcctgacgttgccggggggcgacctggatgtggtc
atcctgggggtcggctccgagctggacacggcgggctcggggttctcagcacgcgagcgc
cagcagaaggtgcagctgctggaggacctgctggacgcgctgctcgccaccaagctgctg
caggggcgcgtggagctgatcgacgcgcgcgtgcccatcatcaagtgctgcatggccgcg
gccggcggcctccatgtcgacatctccctcggcacggccaacggcgcggcggccgcgcgc
tacgttcgcgctcaggtgctggcgatcccgccgctgcgcccgctgtgtctggtgatcaag
gccctgctcaggcagaaggggttcaaccaggtattcaccggcggcatctcctcctactcc
ctctgcaacatggtgcgcatgtgggtgctggcctatctgcagagcgagggttacaagctg
ggcgaggtccccggggacccaggagaagtgagctcggagctggagggtgtgttcgccttc
ctgaccgacctccactgcgaggggctgcatggcgagagcgccggccccggcccccccggg
gcgagcacggcggacctggggcggctgctgtggggcttctgcaacctgtttgggtacgcc
ttccgctacagccaccaggccgtttcgccagcgcggggcggcatctgcaagaagatcggg
ccttggaggcaggaccaccggggctggctgctggccgtggaggacccccaacagatgggc
aaagacatcggttcagggagctacgagatccgagccatccgggagatgtttgccgaagtg
gcagacaagctgggggagagcctggaggaccttgcggcgcagcggcaggctcgggggtgc
cagccggcctcgccgcctcccctcctgcctggcatcgtggacatggtggccgcggtggcc
cgtggtgcgtccggcctcaaggcacggcgagcgctggaggcacagcagactgccaagagc
gccgaggccaagaggtatcgctcccagtcgccgcgtcgctcgtatggccggcacagaccc
tgggaggaggagtggggaaagcggctcaggtcgccgtcacctccctcgggggagcagcgg
gagaggccctacagcggccggacgccctaccagccccagcgctcctccaggcacacgccc
ttgcccaggctcacgcctaaagggaaagcgggtcccaagccaaaagccacgccccagccg
agtgccgcgcacaagcccacttcgggaggcaaaggcaagggcacaaagcgggcccgggct
gtggaggcgcagtggagcaacaagaaggggcagttcctcgagagcaggtgctttgtgcgg
ctatttgaggaaaaaggggttcagggcgggtcctga

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