KEGG   Auxenochlorella protothecoides: F751_5541
Entry
F751_5541         CDS       T04132                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    F751_5541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:apro03041]
    F751_5541
   04121 Ubiquitin system [BR:apro04121]
    F751_5541
Spliceosome [BR:apro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    F751_5541
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    F751_5541
Ubiquitin system [BR:apro04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    F751_5541
SSDB
Motif
Pfam: SART-1 HIND Rota_VP2
Other DBs
NCBI-GeneID: 23616932
NCBI-ProteinID: XP_011395698
UniProt: A0A087SAS8
LinkDB
Position
Unknown
AA seq 722 aa
MGDRETSANDGGGGEISMSTEETNRLRISLGLKPLSTTTQPSALKELEAGQERRKAAEDA
EASKALVARLAQAKEKRRQEELLKSTKKLGETGDDIDNDTLQWIERSRRVEAERKRKQAA
AKPIRAMNDSDEDEEEDAAASHTGADLAGFKVKHSVDDLEAGESVILTLEDRGILDDKGN
LIDDEEAALENILVREIKQREKAYRDSGKVAKPLWEEDGRQRTLLDKYDEEEEQVIQLGG
DGSVVATQKQQLQGDVNARLKAGLALLEQVKPASDYYTPEEMEQFKPKKTKKVRKLKKKA
LTAEELEALAESTAAAAAALNQVNYASLALRNADAQPSTADFDDDDDDAVLAASLQRERL
RALKEGGTAGADPDSLADQLRQRRSRRPAAAEGEGPSGDAADQGLVFTGIGEITRAIQVA
PGEPAEGSAGQGAAPSGALERMEVDEAPMPTEQPPPLPPSGEAEAGEAEPMDGQSQAIDE
PRESGFGRWAPVSEGGSAEDAIKERIKAKIRPPAPKVETGKEKVTLQRDEVVGDRAIGAG
MAGALAFLQSRGDLDTAVEWSGRTNDSKKVNIQGLDEVYSGGRTEDRQALSVENSKEKKR
RKVEEEMARKRAASGAVESGALEQMKQVQRREAQPYVVISGTVRPGQSRDVVAGRGGYDP
GDPDLDEDGVDPLAPRLGGSASLAPLTGNAKVAAMLGLAGVDEGGRSVSRGKRTPSRGAR
GS
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgggcgaccgcgagacgtccgccaacgatggcggtggaggcgagatttccatgtccaca
gaagagaccaacaggctgcgcatttctctgggcctgaagcctctctccacgaccacccag
ccctccgccctcaaggagctggaggctgggcaggagcgccgtaaggctgcagaggatgcc
gaggccagcaaggccttggtcgcacggctagcacaagccaaggagaagcggcggcaggag
gagctcctgaaatccaccaagaagctgggagagactggagatgatatcgacaatgacacc
ctccagtggatcgagcggtctcgcagggtggaggctgaaaggaagaggaaacaggcggct
gcaaagcccatccgagcaatgaatgactctgacgaggatgaggaggaggatgcagcggca
agccacactggcgcagacctggccgggttcaaggtgaagcactcggtggatgatctggag
gcaggggagtcggtcatcctgaccctggaggatcgaggcattctggacgacaagggcaac
ctgatcgacgacgaggaggcagcgctggagaatatattggtgagagaaatcaagcagcgg
gaaaaggcgtatcgcgactctggaaaggtggccaagcctctgtgggaggaggatgggcgg
cagcgcaccctgctggacaagtatgacgaggaggaggagcaggtcattcagctggggggt
gacggcagcgtcgtggccacgcagaagcagcagctccagggggacgtgaatgcgcggttg
aaggcagggctggctttgctggaacaggtcaagccagcgtccgactactacacgccggaa
gagatggagcagttcaagcccaagaagacgaagaaggtgaggaagctgaagaagaaggcc
ctgactgccgaggagctggaggcgctggcggaaagcacggcggcggctgccgcagcgctg
aaccaggtcaattatgcgtccctggctctgcggaatgcagacgcgcagccctccaccgca
gactttgacgacgacgacgatgatgcggtgctggctgcctccctgcagagggagcggctg
cgtgcgctgaaggaggggggcacggcgggggcagacccggattcgctggcagatcagctt
cggcagcggcgctccaggcgcccggccgccgcggagggcgaggggccctcaggtgatgcc
gccgatcaggggctggtgttcaccgggatcggggaaatcacgcgcgccatccaggtggcc
cccggcgagcccgcagaggggtcggccggccagggcgcggcccccagtggggccctcgag
cgcatggaggtagatgaagcgccgatgcccacggagcagccgccgcccctgccgccgagc
ggggaggccgaggcgggcgaggcagagcccatggacggccagtcacaggcgatcgacgag
ccgcgggagtcgggatttggccggtgggcccctgtgagcgagggtgggtcggcagaggac
gccatcaaggagaggatcaaggccaagattcggccgccggcgcccaaggtggagacgggc
aaggagaaggtgaccctgcagcgggacgaagtcgtcggcgaccgagccatcggcgccggc
atggcgggcgctctcgctttcctccagtcccgcggcgatctggacactgccgtggagtgg
tctgggcggacgaacgactccaaaaaggtcaacatccaaggcctagatgaggtgtactct
ggcggccgtaccgaggaccggcaggcgctgagcgtggagaactccaaggagaagaagcgg
cggaaggtggaggaggagatggcccgcaagcgcgcggcctcgggcgcggtggagtccggc
gccctggagcagatgaagcaggttcagcgccgggaggcgcagccctacgtggtcatctcc
ggcacggttcgccccggccagagccgggacgtggtggcggggcgcggcgggtacgacccc
ggcgaccccgacctggacgaggacggggtggacccccttgcgccgcgcctgggcggcagc
gccagcctggcgccgctgaccgggaacgccaaggtggcggccatgttgggcctcgccggg
gtggatgagggggggcggagcgtgagcagggggaagcggaccccctcccgcggtgccagg
ggctcctga

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