Auxenochlorella protothecoides: F751_5588
Help
Entry
F751_5588 CDS
T04132
Name
(RefSeq) Regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03013
Nucleocytoplasmic transport
apro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
F751_5588
03015 mRNA surveillance pathway
F751_5588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_5588
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
F751_5588
mRNA cycle factors
P-body specific factors
F751_5588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
23616979
NCBI-ProteinID:
XP_011395745
UniProt:
A0A087SAX5
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MTQAEERTKVVVRHLPPSLSEDAFKSAVQEWLDRSNWSAYYQGKVSAKEHVHSRAYLNFK
DPADALRFSAAFNGNLFVSDRGAHTRARVEYAPFQRVPRATNRRDPREGTIEKDAGYRAF
LKSLDEETQTKPSALPAPQPPMETDALTPLVLFLKEKRAKDKLKAAAVAAAKKGGKGPPA
AKTAPQVQLKQQPGGAGKQGTATPEVSKPARGKKAAKGAAAAQDAAKSAKAKPGDHGKPG
AVPKEAGPGAKNAGKKAGAPGGAQAAEASPASLPKQKKAPVTIQMIKRVAPGGGGKAEKA
GPGLTQLQGQPLAPSRQRAGSLPSGNGEATGAQPQGSRDASGGAARTPDPSRRNPTAILK
RAGAGATGEGPQPAPDLGAAAAPAAAPAGKPGAEPAPSTRGGKPVRVREGFQAFQPKRVG
RLTEGSGATGAGLSPVGEERSAPHHPAPRKKKVGRGDPANPGLSAEGKTQAAAGG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggcggaggagaggacaaaggtggtggtgcgtcacctccctccatccctgtcc
gaagacgccttcaagtcggccgtgcaggagtggctcgacagatccaactggtccgcctac
taccagggcaaagtcagcgccaaggagcatgtgcattcgagggcgtacctgaatttcaag
gaccccgcggatgccctccgattcagtgctgcattcaatggcaatctcttcgtttcggac
cgaggagcccacacgagggctcgggtcgagtatgctcccttccagcgtgtaccccgtgca
accaatcgccgagacccacgcgaaggcacaatcgagaaagatgccgggtatcgtgccttt
ctcaagtcgctggatgaggagacccagaccaaaccctctgcccttccagcaccccagccg
cccatggagaccgatgccttgacccccctggttcttttcctgaaggagaagcgagccaag
gacaagctgaaggcggcggcggtggccgccgccaagaagggtggcaagggaccgcccgca
gcgaagacggcgccgcaggttcagctcaagcagcagccgggtggggctgggaagcagggc
accgccacgccagaggtcagcaagcctgcacgggggaaaaaggccgccaagggcgccgca
gcggcccaggacgcagcaaagtccgccaaggccaagcctggggatcatggcaagcccggc
gctgtccccaaggaggctgggcccggcgccaagaacgctggcaagaaggctggggctcca
ggaggggcgcaggcagccgaggctagcccggcctccctgcccaagcagaagaaggcccct
gtgaccatccagatgatcaagagggttgccccaggcggcggcggtaaggcagagaaggca
gggcccggcctcacgcagctacaggggcagccgctggcgccctcgcggcaacgagcaggg
tccttgccctcaggaaatggcgaggctactggagcacagccgcaggggtcccgagacgcc
agcggtggagccgccaggacgccagaccctagcaggaggaatcccacagccatcctcaaa
cgggcgggggcaggcgcaaccggcgaggggcctcagcccgcgcccgaccttggtgcggcg
gctgcccccgcagccgcgccagctggaaagcctggagcggagcctgccccgtcgaccagg
ggggggaaacctgtgcgtgtgcgggagggcttccaggccttccagcccaagcgagtcggc
cggctgacagagggctcgggagcgacgggggccggcctctcccctgtcggcgaggagagg
tcggcaccgcaccacccagccccccgcaagaaaaaagtgggacgaggggacccagcaaac
cccggcctgtcggcggagggcaaaactcaagccgcggccggcggatga
DBGET
integrated database retrieval system
