Aspergillus puulaauensis: APUU_51090S
Help
Entry
APUU_51090S CDS
T08081
Symbol
PFS2
Name
(RefSeq) pre-mRNA cleavage and polyadenylation factor (CPF) complex subunit
KO
K15542
polyadenylation factor subunit 2
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
APUU_51090S (PFS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apuu03019
]
APUU_51090S (PFS2)
Messenger RNA biogenesis [BR:
apuu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
APUU_51090S (PFS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
MIOS_WD40
eIF2A
PAN2_N
Motif
Other DBs
NCBI-GeneID:
64976384
NCBI-ProteinID:
XP_041558573
LinkDB
All DBs
Position
5:join(2844158..2844239,2844297..2844412,2844472..2844672,2844722..2846107)
Genome browser
AA seq
594 aa
AA seq
DB search
MAYYDDSGNDGQPFGRGQGGIQGPRRPRLVTDYGSSMVQWMRHRRPKYRGGYRMETERPS
ASYMVDMLPPMARVHSPVNTIPVRHLHQSIGKSKKPITVVRWTPEGRRLLTGGHTGEFML
WNGTAFNFETVMDAHYDQLQAGVTSLAWSHSNDWLISGGQKGDVKYWRPNFNNVETIDDA
HHDAVRDLAWSPSDTKFLSASDDTTLKIYDFTTRTCDSVLTGHNWDVKSCDWHPTKGLLV
SGSKDHQVKFWDPRSTRCLTTLHSHKNTVTATRFSRVNSNLLATSSRDQTARVFDLRMMR
DICILRGHEKPISTLTWHPVHCSLISTGSEDGSLYHYLLDEPNLPAGQVPTVAPYDSPDP
ANTPAQVIYPAHRVQYAHGATIWTLDWHPLGHILASGSKDNFTRFWSRARPGEITYLKDR
FHIGEEAAEAQGTWNRNFGKRQMREEEEQELQDEEDSLVDQRTSAGTGLPGIQSAPQPDG
LGSSLLPGIGGAQPPPPPGLAASMAQPPANAFPPNPVFPAFPFAPPFSGAPPASGTPPMN
APNVDLAELQKQLAAQGISLPPGFPHHLPPVSAPMGGGLPGLQGMFPPDNNYGR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcttattacgacgactctgggaatgacgggcagccatttgggaggggccagggcgga
attcaaggacctcgtcgacccaggcttgtcaccgattatggttcctcaatggtacaatgg
atgcgccatcggcgaccgaaatacaggggcggctatcggatggagacagagagaccgagc
gccagctatatggtggatatgctccctcccatggcacgagtgcactcgccggtaaacacg
atccccgtacggcacttacaccagtctatcggaaagtcgaaaaagccgatcacggttgtc
agatggactccggaggggaggcgcttgttgactggtggacataccggagagtttatgcta
tggaacggcacggcattcaatttcgaaacggttatggatgcacattacgaccaattgcaa
gctggagttacatcgttggcgtggtcgcatagcaacgactggttgatttctggaggacaa
aagggtgacgtgaaatattggaggccgaatttcaacaacgttgagacgatagacgacgca
caccacgacgctgtacgagatctagcttggtcaccgagcgatacgaaattcctctcggcc
tccgacgacacgacccttaagatctacgatttcacgaccagaacatgcgacagcgtcctg
acaggccataactgggatgtcaaatcatgcgactggcatccgacaaagggactgcttgtt
tccggttcgaaagatcatcaagtcaaattctgggaccctcgcagcacccgctgcttgacg
acacttcacagccataaaaataccgtgaccgctactaggttttcccgggtgaacagcaac
cttcttgcaacgtcgtcgcgcgaccagaccgcacgagtttttgatctccgcatgatgcgg
gacatttgcattctccgtggtcacgaaaaaccgatatctacgcttacatggcacccggtt
cactgctctcttatctcaacaggaagtgaagatgggtctttatatcattacttgcttgac
gagcccaaccttcctgccggccaagtccctaccgtcgcaccttatgatagtccggatcca
gcaaatacgccggcccaggtaatctacccagctcatcgggtgcagtatgcccacggcgcg
acaatttggactctagactggcatcctctaggtcacatccttgcttcgggatcgaaagac
aacttcacccgattctggtctcgtgctcgaccaggagagataacctacttgaaggatagg
ttccacattggagaggaggctgctgaagctcaaggaacatggaaccgcaactttggaaaa
cgacaaatgcgcgaggaagaagaacaggaactacaggatgaagaagatagtttggtcgat
caaaggacatccgccggtacaggtcttcccggcatacaaagtgcgcctcagccggatggg
ctgggttcatctttactacctggcataggcggtgcccaacctcctccaccacctggatta
gctgcctctatggcccagcctccagcaaatgctttccctccaaaccctgtcttccccgcc
ttcccctttgcgcctcccttctccggggctcctccagcatcggggacaccaccgatgaat
gcgcccaatgtcgacctcgcggagctccaaaaacagcttgctgcgcaaggaatctcactc
ccgccaggtttcccccaccatctacctccagtgtcagcgccgatggggggcgggcttcct
gggttgcagggcatgttccctcctgataacaattatggccggtga
DBGET
integrated database retrieval system
