Aquimarina sp. AD1: D1815_04225
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Entry
D1815_04225 CDS
T05625
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
aqa
Aquimarina sp. AD1
Pathway
aqa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1815_04225 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqa03400
]
D1815_04225 (uvrA)
DNA repair and recombination proteins [BR:
aqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1815_04225 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D1815_04225 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
DnaJ_CXXCXGXG
nSTAND3
AAA_22
AAA_14
AAA_21
AAA_25
Viral_helicase1
NMDAR2_C
T2SSE
cobW
MeaB
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AXT54999
UniProt:
A0A3A9X4M8
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All DBs
Position
complement(927952..930783)
Genome browser
AA seq
943 aa
AA seq
DB search
MAVSEENIEVLGARVHNLKNIDVTIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGSLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEIYDFLRLLFARGS
DAYSYNTGEKMVSYSDEQIKDLILKDFNGKRINILAPIIRSRKGHYRELFEQIAKQGFVK
VRTDGEIKDITKGMKLDRYKNHDIEIVIDRLAVSNDKDNSKRLMETINTAMYHGDDVLMV
IEQESQEARFFSRNLMCPSSGISYPNPEPNNFSFNSPKGACPKCNGIGNLYEVNVKKIIP
DDSKSIKNGGLVPQGPQKNNWIFKQLELIAQRFDFKLSDPIKNIPAEAMEIILYGGKEKF
TVDSKTLGVKREYKIDFEGIATFIDNTYTNNDSTSLRRWAKDFMDNIQCPECNGSRLRKE
SLYFKVGEKNIADLANMDISELADWFKKLPERLSEKQKQISGEILKEINARIQFLIDVGL
TYLSLNRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNEKLINSLVQLR
DIGNSVIVVEHDKDMIERADHVIDIGPRAGKHGGEIISEGTPKNLLTHNTLTADYLSGKK
EIKVPEKRRQGNGKKISLTGATGNNLKNVSIDIPLGKMVAVTGVSGSGKSTLINETLYPI
LNAYYFNGVKKPMPYKKIKGLENADKVIDINQSPIGRTPRSNPATYTGVFSEIRNLFSKT
PEAMIRGYKPGRFSFNVAGGRCETCKGGGLRVIEMNFLPDVYVECETCQGKRFNRETLEI
RYKGKSISDVLEMTINEACDFFDQIPKIFRKLKTIRSVGLGYITLGQQSTTLSGGEAQRI
KLATELSKRDTGNTFYILDEPTTGLHFEDIRVLMDVLNELVDKGNTVLIIEHNLDVVKMA
DYIIDIGYEGGKNGGEVVAKGTPEQIIKNKKSYTAKFLEKELR
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttcagaggaaaatattgaagttttaggtgcaagagttcataatctaaaaaat
attgatgtaaccataccccgtgaaaaacttgttgttataacagggttatccggatcaggt
aagtcgtcattggcttttgacacaatatatgctgaaggacaacgcaggtatattgaaact
ttttctgcatatgccagacaatttttagggagtttagaacgacctgatgtggataaaatt
gatggcctctctcctgttattgctattgaacaaaaaaccacaagtaagagtccgagaagt
acagtaggaacaattacagaaatttatgatttcctaagactattgtttgcacgtggaagt
gatgcctatagctataataccggcgagaaaatggtaagctatagtgatgagcaaatcaaa
gatcttattctcaaagattttaatggaaagagaataaatattctcgctcctattatacga
tctagaaaaggacattaccgagaactttttgagcaaattgccaaacaaggttttgttaag
gtaagaactgatggtgagattaaagatatcaccaaaggcatgaaattagatcgatataaa
aatcacgatatcgagattgttattgaccgtcttgctgttagtaatgataaagacaattct
aaacggctgatggaaaccattaatactgctatgtatcatggtgatgatgtcttaatggta
attgaacaagaatcccaagaggcacgtttctttagcagaaatttaatgtgcccttctagt
ggaatctcctatcctaaccctgaaccaaataacttttcatttaactctccaaaaggagca
tgtcctaaatgtaacggtattggaaatctgtacgaggtaaacgtaaaaaaaattatccct
gatgattctaaatcaattaaaaatggaggtttagttccgcaaggacctcaaaaaaataat
tggatttttaagcaacttgaattaattgcccagcgttttgacttcaaattaagcgacccg
ataaagaatattccagcagaggctatggagattattctttatggaggaaaagaaaaattc
actgtagatagtaaaacacttggtgttaaaagagaatacaaaattgattttgaaggaatt
gccacatttatagacaatacctacactaataatgattcgacttctttacgtagatgggca
aaagattttatggataatattcaatgtcctgaatgtaatggctctagattaagaaaagaa
tctttatactttaaggttggtgagaaaaatattgctgatttggctaatatggatataagt
gaattggctgattggtttaaaaaattaccagaacgactaagtgagaagcagaaacaaatt
tctggcgaaattttaaaagaaatcaatgctagaatacaatttttaattgatgtcggatta
acttatctatctttaaacagaagcagtaaatcactttctggtggagaagcacaacgtatt
cggttagcaacacaaataggatctcaattagtaggagtattatatatcttagatgaacca
agtattggactacatcagcgagacaatgagaagttgattaactccttagtacaattaaga
gatataggtaattccgtgattgttgtagaacacgataaagatatgatcgagcgagctgat
catgtcattgatattggacctagagcaggaaaacacggaggagaaattattagtgagggt
actccaaaaaacctcctaactcacaacactcttactgctgattatttaagtggtaaaaaa
gaaattaaagttcccgaaaaaagaagacaaggaaacggtaagaaaatctctttaactgga
gcaaccgggaataatctaaaaaatgtttctatagatattcctttaggaaagatggttgct
gttacaggagtttctggtagtggtaaatctacactgataaatgaaacattatatcctata
cttaatgcatattattttaatggagttaagaaaccaatgccttataaaaagataaaaggc
ttagaaaatgcggataaagtaatcgatattaatcaatccccaattggaagaacaccaaga
tctaatcctgctacatataccggtgtattttcggagattagaaatttattttccaaaaca
cctgaggcaatgattcgaggatataaacctggacgttttagttttaatgtagctggaggt
agatgtgaaacctgtaaaggaggaggtttgcgagttatagaaatgaatttcttaccagat
gtgtatgtagaatgcgaaacatgtcagggaaaaagatttaatagagaaaccctagaaata
agatataaaggaaaatccatctctgatgtgttggaaatgacaatcaatgaagcttgtgat
ttttttgatcaaattcctaaaatttttagaaaacttaaaactattagaagtgttggttta
ggatatattacacttgggcaacaatccacaacactatcaggtggagaagcacaacgaata
aaactggctaccgaattgtccaaaagagataccggaaatactttttatatcttagacgag
ccaacaacagggcttcattttgaagatattagagtattaatggacgtattaaacgaatta
gttgataaaggtaatacggtactaataattgaacataaccttgatgtagtcaaaatggct
gattatattattgacataggatatgaaggtggtaaaaacggtggtgaggtagtagcaaaa
ggtactcctgaacaaattattaaaaacaagaagagttatactgcgaagtttttagaaaaa
gaactgcgataa
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