Amphimedon queenslandica (sponge): 100631937
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Entry
100631937 CDS
T02284
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100631937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aqu03041
]
100631937
Spliceosome [BR:
aqu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100631937
Complex C
U5 SnRNP specific factors
100631937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFTUD2
GTP_EFTU
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
Roc
Ras
TniB
Motif
Other DBs
NCBI-GeneID:
100631937
NCBI-ProteinID:
XP_003383139
UniProt:
A0A1X7VQM3
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MEGDLYDEFGNYIGPELESDESEEEEDREEEDEEQTNEDMTLPEDDEGEDDMETGTVALV
APETQAVVLHEDKKYYPTAEEVYGPEVETIIQEEDTQPLTEPIIAPVKKKKFTIQEKGLP
RTNYKIEFLADLMDSPQLIRNVAIVGHLHHGKTSFVDNLVEQTHPDIYVGETKNLRYTDT
LFTEQERGVSIKSTPLTLVLPDTKDKSFLMNLYDTPGHVNFSDEVTAAFRLCDGVMIVVD
VSEGVMMNTERLIKHALQEKLAITICMNKIDRLILELKLPPQDAYYKLKHTLDEINSLLS
LYSESTEGVVVSPLLGNVCFSSSQYGFSFTLESFAQLYSDLYGGGFSPKEFAKRLWGDIY
FNKTKRTFTKKIPSTDSQRTFIEFILEPLYKIFAQTVGDVDTTLPSVLKELGVFLSKSEL
KLNIRPLLRLVCQRFFGEARGFVDMCVKHIPSPVEAARTKIEHTYTGILDDDEWTQSLMT
CDSDGPLMVHVTKLYPTQDATQFHAFGRVISGTLYSGEQVRVLGESFTLEDEEDSKVCQV
GRLWVAEARYTIEINRSPAGTFVLIEGIDSTITKTATVTQLSGSEDAQIFRPLKFNTQSV
IKIAVEPVNPSELPKMLDGLRKVNMSYPLLVTKVEESGEHVVLGTGELYLDCVMHDLRKM
YSEIDIKVADPVVAFCETVVETSSLKCFAMTPNKRNKLTMIAEPLEKGLAEDIENEVVQM
TWPKKKLAEFFQTKYEWDLLAARSIWSFGPEMTGPNILVDDTLPTEVDKTLLHSVRDSIV
RGFQWGAREGPLCEEPIRNVKFKVLDAKISEDPLQRGGGQFIPTARRVAFSAFVMATPRL
MEPYYLVEVQAPADCVSAVYSVLGKRRGHVTQDAPEPGSPLYIIKAFIPAIDSFGFESDL
RTHTQGQAFCLSVFHHWQIVPGDPLDKTIPIRPLEPQPAPHLAREFMVKTRRRKGLPEDA
SINKFFDEPMLLELARQDIMLSYQM
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacctttatgatgagtttggtaattatataggcccagagctggagagtgat
gagagcgaagaggaggaggacagagaagaagaggacgaggaacaaacaaatgaagacatg
acactaccagaagacgatgaaggtgaggatgacatggagactggtacagtggcgctggtc
gctccagagacacaggccgtggtgttgcatgaagacaagaaatactatccaacggcagaa
gaagtttatggacctgaagtagagactatcatacaagaagaggatactcaaccattgaca
gaaccaattattgcacctgtgaaaaagaagaaatttacgatacaagaaaagggactgccc
cgcactaactataagattgagtttttagccgacctcatggatagtcctcaactgattcgt
aatgtggctatagtcgggcacctccaccatggaaaaacgtcatttgttgacaatttagtc
gagcagactcatcctgatatctatgttggagaaactaaaaatttaaggtatactgatact
ttatttactgaacaagagcgtggtgttagtatcaagagcactccattgacactagtacta
cctgacacaaaggataaatcatttttaatgaatctctatgatacaccaggtcatgttaat
ttttctgacgaggtgacagctgcttttcgtttgtgtgatggagtaatgattgtagtggat
gtatcagaaggagttatgatgaatactgaacgactcattaaacacgctttacaagaaaaa
ctcgccatcacaatttgcatgaacaagattgataggttgatattagaactaaagctaccg
ccacaagacgcttattataaactgaaacacactttggatgagattaatagtttattgagt
ttatattctgagtcgacggagggtgtggtcgtctctccgttgctaggcaacgtctgtttc
agctccagtcaatatggcttctccttcactctagagtctttcgctcaattgtacagtgac
ctttatggtggagggttttctcctaaagaatttgctaaaagactttggggagacatttac
tttaacaagacaaagaggacattcactaaaaagattccatcaaccgacagtcaaagaact
ttcatcgaattcattttagagccactgtacaagatatttgcacagacagtaggcgacgtt
gatacaaccctaccatcagttcttaaagaattaggcgtgtttttgagtaaaagtgaacta
aagttaaacatcagacctttactgaggctggtctgtcagcggttctttggagaggcgaga
gggtttgttgatatgtgtgtgaagcatataccatctcctgtggaggctgctcgaactaaa
atagaacacacgtacactggtatactggacgatgacgaatggacgcagagcctaatgacg
tgtgactcggacgggccactaatggttcacgttactaaactgtatccaactcaagatgcc
acacaattccatgcatttggacgagtgatcagtggaacattatacagtggggagcaggtg
agggttcttggtgagagttttacgctagaggatgaggaagattctaaagtttgtcaagtt
ggtagactatgggtggcagaggcaagatacactattgaaataaacagaagtccagctggt
acctttgtactcattgaaggaattgattccacaataaccaagacagcaactgtcactcaa
ttgagcggaagtgaagacgctcagatatttcgtccattaaagttcaacactcagtctgtg
ataaagattgcagttgagcctgtcaatccttcagagctgccaaagatgttggacggacta
cggaaagttaacatgagctatcctcttcttgtcactaaagtggaggagagtggggagcac
gtggtgttgggcactggcgagttgtacctggactgtgtcatgcatgatctcaggaagatg
tactctgaaattgatatcaaggtagctgatccagtggttgctttctgtgagacagtagtt
gaaacctcatcattaaagtgttttgcaatgactcctaacaaaaggaacaagttgacaatg
atagctgagcctcttgagaaaggattagccgaagacattgaaaatgaagtggtacagatg
acctggccaaagaagaaactcgctgagttttttcagaccaagtacgagtgggacttactg
gctgctcgttccatatggtcgtttggccctgaaatgactggacccaatatactggtggat
gacacactgcctactgaagttgataagaccctcctccactctgtgagggacagtattgta
cgtgggttccaatggggagccagagaaggacctctttgtgaagaaccgattagaaatgtt
aagttcaaggtacttgatgcaaagatatcggaagaccctttacaaagaggaggtggtcag
ttcatccctactgcccgtcgtgtggccttctctgcctttgtaatggccacgccccgttta
atggaaccctactatctagtggaggtacaagcacctgctgattgtgtatcggctgtgtat
tcagtccttgggaagagacgtggtcatgtgactcaagatgctcctgagcctgggtctcct
ctttatatcataaaagctttcattcccgccatcgactcctttggttttgagtcagacctt
cgtacccacactcagggacaagccttctgtctatcagtgttccaccactggcagatagtt
ccgggagatcctttggataagactatcccgataagaccattggagccacaacctgctcct
catttagccagggagtttatggtgaagactagaaggagaaagggtttacctgaagatgct
tccataaataagtttttcgatgagccgatgttactggaactggctaggcaggacattatg
ctcagctatcagatgtga
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