Amphimedon queenslandica (sponge): 100638044
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Entry
100638044 CDS
T02284
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03015
mRNA surveillance pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100638044
09123 Folding, sorting and degradation
03018 RNA degradation
100638044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100638044
03041 Spliceosome [BR:
aqu03041
]
100638044
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100638044
mRNA cycle factors
Stress granule specific factors
100638044
Spliceosome [BR:
aqu03041
]
Complex C
Other components
Complex C specific factors
100638044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
OB_RNB
Ribosomal_L21p
Motif
Other DBs
NCBI-GeneID:
100638044
NCBI-ProteinID:
XP_003386437
UniProt:
A0A1X7UXV6
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MAVNMNPPPSFPPLQSLYVGDLLPDVNEAVLFEQFSKAGPVLSIRVCRDLITKRSLGYAY
VNFQQPADAERALDTMNYEPIKGQPCRIMWSQRDPSLRRSGVGNIFIKNLDKSIDHKALY
DTFSAFGNILSCKVATDGNRHSKGFGFVHFDEQEAADLAIEKVNGKLLNDMKVYVGKFIP
RKDRSHTNGFNQHYTNVFIKNFGEDFTDTMLYDVFEKYGSIVSAVVMKDGEGLSKGFGFV
SFESHEAASAAVQAVHNSIVNGRQVYCGRAQKKNERSRELMRRKEEQRQERLSRYQGVNL
YIKNLEDTLGEEKLKSEFSKFGSITSAKIMTDEFGHSKGFGFVCFSSPEEATKAVTEMNG
RIVVSKPLYVALAQRKEERQAHLAAQRMQRIARGIPQGQMQMYPPYYMPGIQNQRPFFTA
MAAGYTARPWQGGPMHRPFSGGYNMHHRTRANVPRPSVGGAGGAGGQRMNTPQTQRIAPQ
QRLNPQGRPGGVQQTKLQFSAGARNQPGGPMGGGMDLGQDPEPLSTLSQTDPMKRKQIIG
EHLYRAISASHPDKAGKITGMLLEMDNSELLHMLEAPESLNSKVEEAVNVLREHEQQQQQ
QMSGFSGQSNLPIAAESA
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaatatgaaccccccgcctagttttccaccacttcagtctctttatgtcggt
gatcttctccctgatgtcaatgaagccgttctttttgaacagtttagtaaagctggtcct
gtgctctccattcgtgtttgtcgtgatctcatcacaaagcgatcgttgggatacgcttat
gtcaacttccagcagccagcagatgctgaaagagcattggatactatgaactacgagcca
atcaagggacagccttgtcgtatcatgtggtcccagcgtgatccctccctccgtcgctcc
ggagtcggaaacattttcattaagaatttggacaagtccattgaccacaaagctctgtat
gacacttttagtgcctttgggaacattctttcatgcaaggtggcaactgatggcaacagg
cactccaaaggctttggttttgttcattttgatgagcaggaggcagctgaccttgccatt
gagaaagtcaatggaaagttactcaatgatatgaaagtttatgttggcaagtttatacca
aggaaggacagatctcatactaatggtttcaaccagcactacaccaatgtctttattaag
aattttggagaggactttactgatacgatgctgtacgatgtctttgagaagtatggtagc
atcgtctctgctgttgtgatgaaggatggtgaaggtctctctaaaggctttggatttgtg
agctttgaatcacacgaggcagcctcagctgctgtacaagcagttcataattctattgtt
aacgggagacaggtttattgtggtagagctcagaagaagaatgagagatcacgcgagctg
atgcgtcgtaaggaagagcaaaggcaggagagactctcgcgctatcaaggagtcaacttg
tatattaaaaacctggaagatactcttggcgaagaaaagctcaaaagtgaatttagcaag
tttggcagtatcactagtgcaaagataatgactgatgaatttggacacagcaaaggtttt
ggttttgtttgtttctcgtctcctgaggaagccactaaagcagtaacagagatgaacgga
cgcattgtagtctcgaaaccactctacgtggcactggcccagcgtaaggaagagaggcag
gctcaccttgctgctcagaggatgcagaggattgcccgtgggatacctcaaggacaaatg
cagatgtatccgccttactacatgcctggaatacagaaccagagaccattcttcacagca
atggctgcagggtacaccgctcgtccatggcaaggtggaccgatgcaccgcccattctcc
ggaggatacaacatgcaccacaggacacgagccaatgtcccacgtccttcggttggagga
gcaggaggcgctggtggtcagaggatgaacactcctcagactcagaggatagcaccacag
cagcgactcaatcctcaaggacgaccaggtggagtccagcaaacgaagctccaattctct
gcgggtgctcggaaccaaccaggaggacccatgggcggaggaatggatctgggacaagac
ccagagccgctgtccaccctctctcagactgaccccatgaagaggaagcagatcattgga
gagcacttgtacagggctatctctgcctctcaccctgataaggctgggaagataactggg
atgttgctggagatggacaactctgagctccttcatatgttggaggctccagagtctctc
aatagcaaggttgaagaagctgttaatgttcttcgtgaacatgaacagcagcagcagcag
caaatgtctggattttctggtcagtctaatcttcctattgcagctgagagtgcttaa
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