Amphimedon queenslandica (sponge): 100641246
Help
Entry
100641246 CDS
T02284
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03040
Spliceosome
aqu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100641246
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100641246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aqu03041
]
100641246
04121 Ubiquitin system [BR:
aqu04121
]
100641246
03400 DNA repair and recombination proteins [BR:
aqu03400
]
100641246
Enzymes [BR:
aqu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100641246
Spliceosome [BR:
aqu03041
]
Complex B
Other components
Prp19 complex
100641246
Complex C
Prp19-CDC5 complex
100641246
Ubiquitin system [BR:
aqu04121
]
Ubiquitin ligases (E3)
U-box type E3
100641246
DNA repair and recombination proteins [BR:
aqu03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
100641246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
NBCH_WD40
U-box
Nup160
eIF2A
Ge1_WD40
zf-Nse
Cytochrom_D1
PAS_11
zf-C3HC4_2
RMC1_N
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100641246
NCBI-ProteinID:
XP_003385193
UniProt:
A0A1X7V885
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MALICSICQEVPEEPVLSVVSNHVFERRLILKYLQENGTDPINGEPLEESQLLEIKSSPL
VKPRPPSATSIPAILKLLQDEWDSCMLHTFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVNGAREALATLKPQAAAYMPPGATEAPTGAEAMDNTEAGPTEMTEEILQQLLETAAM
LTADRKKRGKKKPEGLCTVEEMKTFEQKSSHPGLHSSSVPGILALDVSADSKRVLTGGAD
KTAIVFIKDTEQIYATMKGHTKKISSVIYHPKVELAITGSADSTVRVWSIDTSVCAQTIK
AHDGGVTSVSLHPTGSYLLTSSTDDYWAFSDITSGHVLTKANSPSGPTALTCAQFHPDGL
IFGTGTASSEVRIWDLKERTNVANFQGHSGAITSIAFSENGYYLATGAEDSQVQLWDLRN
LKNFETINLGKGYEVKNVSFDVSGTYLAIAGTDIQVYLCKQWDQLATLKDHTSVVNGIKF
GHNASFLASCSMDRTLRFFAPQ
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcatttgctcaatttgccaagaagtaccagaagagcctgttctctcagttgtc
tccaaccacgtgtttgagaggcgccttatcctaaagtatctgcaggagaacgggactgac
cctattaatggagagcctttggaagagagccaattactggagattaaatcttcgccattg
gtaaagcctagacctccctctgctaccagcatcccagcaattttgaaactgttacaagat
gaatgggattcttgcatgctgcatacttttacacttcgtcagcaactacagacagcaaga
caagaactctcccatgctttgtaccagcacgatgctgcctgtcgcgtgattgctcgactc
acaaaagaagtgaatggggccagagaagctcttgctactcttaaacctcaggcagctgct
tatatgcctccaggcgctactgaagctccgactggtgctgaagcaatggacaatactgaa
gctggtccaactgaaatgacagaagaaatattacaacaactactagagacagctgccatg
ctcacggctgaccgtaagaagagaggcaagaagaaacctgaaggattatgtacggtagag
gagatgaagacatttgaacagaaatcatctcatccaggtcttcacagctcaagcgttccg
ggaatattggcactcgacgtgtctgccgactcaaaacgagttctcacaggtggagcggat
aagactgccatcgtgtttataaaagacactgaacagatttatgctaccatgaaaggtcat
accaagaagatttcaagcgtcatctatcacccgaaagtggaattggctatcaccggttct
gctgattcgaccgtgagggtgtggtcgattgatacaagcgtttgtgctcagactattaaa
gctcatgacggaggtgtgactagtgttagtctccatccaactgggagctatctgctaaca
tcgtctacagatgattattgggcgttttctgacattacgagtggtcatgtattgacgaaa
gctaacagtccctctggaccaactgctttgacttgtgcccagttccatcctgatggcctt
atttttggtactggaacggctagcagcgaggtgaggatttgggatctcaaagaacgtacg
aatgttgctaatttccaaggacactccggagccattaccagtattgcattctctgagaat
ggttattatcttgctactggggcagaggattcacaagttcagctctgggatttgagaaac
ttgaaaaactttgagacgatcaatcttggaaaaggatatgaggttaagaatgtttcattt
gatgtcagtggtacttaccttgccatagcaggaactgatatacaggtctacctctgcaag
caatgggatcagttagccacactcaaagatcatacttctgttgtaaatggtatcaagttt
ggacacaatgcctcgttcctcgccagctgcagtatggatagaaccctgaggttctttgct
ccgcaataa
DBGET
integrated database retrieval system
