Rhizobium rhizogenes K84: Arad_2991
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Entry
Arad_2991 CDS
T00850
Symbol
ddlB
Name
(GenBank) D-alanine-D-alanine ligase protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara00470
D-Amino acid metabolism
ara00550
Peptidoglycan biosynthesis
ara01100
Metabolic pathways
ara01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Arad_2991 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Arad_2991 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Arad_2991 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ara01011
]
Arad_2991 (ddlB)
Enzymes [BR:
ara01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Arad_2991 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ara01011
]
Precursor biosynthesis
Amino acid ligase
Arad_2991 (ddlB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
GARS_A
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ACM27043
UniProt:
B9JH46
LinkDB
All DBs
Position
1:complement(2371932..2372858)
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AA seq
308 aa
AA seq
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MGGKHVAVLLGGFSSERPVSLSSGKACADALEAEGYRVTRVDVERDVSARLADLKPDVVF
NALHGPFGEDGTIQGVLEYLQIPYTHSGVMASALAMDKARAKTVAASAGIPVAASLVLNR
FDIAGEHPMPAPYVVKPVREGSSFGVVIVKEEQAHPPQIIASSEWRYGDEVMVERYIHGR
ELTCGVMGDTALGVTEIVPQGHSFYDYDSKYAAGGSKHVIPAEISPNLYQKIQLLALRAH
QAIGCRGVSRSDFRFDDRFSEEGELIWLEINTQPGMTPTSLLPEMAAHAGYSFGEFLRWM
VEDSSCSR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcaagcatgtggctgtccttttgggcggattttcctcggagaggcctgtcagc
ctgtcctcgggaaaggcatgcgctgatgccctggaggccgaaggctatcgcgttacgcgc
gtcgacgtcgagcgcgacgtgtccgcgcgtcttgccgacctgaagccggatgtcgttttc
aatgctctgcacggtcctttcggtgaggatggcacgatccagggtgtcctcgaatatctg
cagattccctatacgcattccggcgtgatggcttcggcgctggcgatggacaaggcccgc
gccaagacggttgcggcttcggccggcattcctgtcgctgcttcgcttgtcctgaaccgc
ttcgatattgccggcgagcatccgatgccggcgccgtacgtcgtcaagccggtgcgggaa
gggtccagcttcggtgttgtgatcgtcaaggaagagcaggcgcatccgccgcagatcatc
gcctcgtcggaatggcgatatggtgatgaggtcatggtcgagcgttatatccatggtcgt
gaactgacctgcggcgtcatgggcgatacggcactcggcgtcaccgagatcgtacctcag
ggccatagtttctacgactacgattccaaatatgcggcgggtggatcaaaacacgtcatc
ccggcggaaatttcaccgaatctttaccaaaagatacaattattggcgttaagggcgcat
caagctatcggctgccgtggcgtcagccggtctgacttccgttttgacgatcgcttctcc
gaggagggtgagcttatctggttggagatcaacacccagccaggcatgacgcctacctcg
ctgttgcccgaaatggcggctcacgccggctattcttttggtgaatttctccggtggatg
gtggaggactcgtcttgttcgcgctga
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