KEGG   Ascochyta rabiei: EKO05_0003639
Entry
EKO05_0003639     CDS       T09445                                 
Name
(RefSeq) DNA repair protein rad50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
arab  Ascochyta rabiei
Pathway
arab03440  Homologous recombination
arab03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:arab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    EKO05_0003639
   03450 Non-homologous end-joining
    EKO05_0003639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:arab03032]
    EKO05_0003639
   03400 DNA repair and recombination proteins [BR:arab03400]
    EKO05_0003639
DNA replication proteins [BR:arab03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    EKO05_0003639
DNA repair and recombination proteins [BR:arab03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     EKO05_0003639
    BRCA1-C complex
     EKO05_0003639
   NHEJ (non-homologous end-joining)
    MRX complex
     EKO05_0003639
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B AAA_21 AAA_13 CENP-F_leu_zip Phage_GP20 AAA_29 AAA_22 TMF_TATA_bd DUF6011
Other DBs
NCBI-GeneID: 62212285
NCBI-ProteinID: XP_038800639
LinkDB
Position
5:join(1440201..1440323,1440391..1444188)
AA seq 1306 aa
MSKIDRMMIQGIRSFGPEKGETIVFTTPLTLIVGWNGSGKTTIIESLRYATTGDLPPNSK
KGGAFIHDPKLRNEKELLAQVKLSFRSSSGVRMVATRNLQVTVTKNGRSQKTLEGSLLML
KDGEKHSISTRVAELDQIIPQYLGVSKAILDNVIFCHQEESLWPLSDASTLKKKFDEIFE
AMKYTKAIENIKMIRKDRNVELGQLKIIEANAKEDKDRAGKSEKRQAALFDEIEQLRGEY
EKIDGECTQAQLKANEAYNHAARYEQILAQLNGKRITFSANKDSVDELQDNLKQMAESDD
ELQEMLDQYEERIATYATQQDDSRQQYGDLKEELQQSRNSLGAKQGEIGKYEAQKEQHDR
QIQLRENIIKETAKRHSIRGYDYDITEKHISDFQQVLSRMSRDQNKSLDRAREDAQRELR
EAQNDLNELNTRKSNLNQGKESARTTITSNDKRISDLQRSMNHIKADEGSEAILQDKKRE
TEEQLNNANSEAASGRFNERIQEVSETVRILEDKKERLTAELGDATKQARESASIDYTRN
ELQSQQHSLEKMKKVHNKRISQLVDPDWDPSTLETTFQSVFSEKSAKVKEATSRRDITQT
KLDNVHFQMSSLESQLKKKRAELQQYERTVKEAIQKDDISDFDETLQQLEDDYDATSTDK
AKFEAQIEYMRQCLMTAERDNTCRLCARALHDDRSQHFTAAGFIEKLNRIIEKAEINMQG
DNAEELLTELEAARNAKPSYELATRLRDSDLPALQKDLAKLSTERDNANKQLEDQDAAIH
DLETEKQDVESLSRDVQTIVHNYNEIIKLEAQVKDLSQKQTTAGLSRGIDAVQADMKKIT
DESRNARNALDQLTSERDKSRNLITTLELRIRDINADLNNAQSKLKEKRALSERIEELRT
ESSNQRETMRGFDRDVEIVVPEIEQAQYKYDDINRRGNEKVQRAHDEASKLSDSVRQLTQ
ADGEINAYIDRGGPQQLARTHRDIENLQGEIARIESEMMEVTRKVKKIEDTMRDTEMTKR
SISDNLRYRKAKRALETLQIEIEKLEEHGAERDKDHYEREAQHWDTRYHQLNTSKTSVER
DMKNKDDQLTELMEEYKSLYEKAANGYREAHIKVETTKAAIEDLGRYAGALDKAIIQYHA
LKMEEINRIIAELWRNAYQGTDVDTIRIAGDSDAKGNSLYNYRVVMVKQDTEMDMRGRCS
SGQKVLASIVIRLALAECFGTNCGLIALDEPTTNLDQQNIQGLAQSLSHIIQMRRKQANF
QLLVITHDEQFLREMNCADYTDVYWRVGRDASQESFIERQNIAEVS
NT seq 3921 nt   +upstreamnt  +downstreamnt
atgtccaagatcgaccgtatgatgatccagggcattcgctcctttggacccgagaagggc
gagaccattgtctttaccactccgcttacgctcattgtcggctggaacggttctggcaag
actaccattattgagtcgctgagatatgcaactacaggtgacctgcccccaaacagcaag
aaaggcggtgctttcatccacgatcccaagctgcgaaatgagaaggaactcttggcgcag
gtcaagctgtcgtttcgttcaagctcgggagtgcgcatggttgccacccgcaatctgcag
gtcaccgtgacgaagaatgggcgcagccagaagacgctcgagggctcgttgctcatgctg
aaagacggcgagaagcactccatctccacccgtgttgccgagctcgaccagatcatccct
cagtatcttggtgtatcgaaagcaattctagataatgtcatcttttgccaccaggaagaa
agcctgtggccgctcagcgatgcctctacgttgaagaaaaagtttgacgagatcttcgaa
gcaatgaagtacaccaaagcgattgaaaacatcaaaatgatccgcaaagaccgcaacgtc
gagctcggtcagctgaagattatcgaagcaaacgcgaaggaagacaaggaccgcgccggc
aagagtgagaagcgacaagctgcgctctttgacgaaattgaacaactccgcggagaatac
gaaaagatagatggagagtgcacgcaagcacagctcaaagccaacgaagcttacaaccac
gctgcaagatacgaacagattctagcacagctgaatggaaagcgcatcactttcagcgcc
aacaaagacagcgtggatgaattgcaagacaacctcaagcagatggcggagtcagacgat
gagcttcaggagatgttggatcagtacgaggaacgcattgcgacatacgctactcagcaa
gacgactcgcgacaacagtacggcgacctcaaggaagagctgcagcaaagcaggaactca
cttggtgcgaagcagggcgagatcggcaagtacgaggcgcagaaagagcagcacgatcgt
cagatccaactgcgcgaaaacatcatcaaagagacagctaagcgtcatagcatccgcggc
tacgattacgacatcacagagaagcacatctccgactttcaacaggtcctgagcagaatg
tctcgcgaccaaaacaaatcactcgatcgtgcacgagaggatgcgcagcgcgagctccgc
gaggcgcagaatgatctcaacgaactcaacacccgcaaatcaaacttgaaccagggtaaa
gaatctgcgcggacgactatcacaagcaacgataagcgcatctcagacctgcagaggtcg
atgaaccatatcaaggccgatgaaggcagcgaagctattttgcaggacaagaagcgcgag
accgaggagcagctgaacaacgcaaactctgaagcagcttcaggtcgattcaacgagcgg
atacaggaagtctcagagactgtacgaatactcgaggataagaaggagcggttgaccgcc
gagctcggcgacgcgacgaagcaggctcgtgaatcggcgtccattgactacacgcgaaac
gagctgcaaagccagcagcacagtctcgagaagatgaagaaagttcacaacaaacgcatc
tctcagctcgttgaccccgactgggacccatcgactctggagaccaccttccagagcgtg
ttctcagagaagtctgccaaagtcaaggaagcaacatcgcgtcgcgacattacccagaca
aagcttgacaatgtccatttccaaatgtcgagcctggaatcacagctcaagaagaaacga
gcagagttgcagcagtatgagaggaccgtaaaggaggccattcagaaggacgatatatcc
gactttgacgagacattgcagcaactcgaggacgactacgatgctacctcgacagacaaa
gcaaagtttgaagcccaaatcgaatacatgcggcagtgtctgatgaccgctgagcgagac
aacacttgccgactatgtgccagggctctgcacgacgacaggtcgcagcacttcaccgcc
gccggcttcatcgaaaaactaaaccggatcatcgagaaagctgagattaacatgcaagga
gacaatgcggaggaactgctgacggaacttgaagccgcgcgcaatgctaagccaagctac
gaactggcaactcgtctgcgcgactccgatcttcctgctctccagaaagatctcgcaaaa
ctgtcaacggagcgcgacaacgccaacaagcaactagaagaccaggatgctgccattcac
gacttagagactgagaagcaagatgtagagtctctttcgagagatgtccagacgattgtc
cacaactacaacgagatcatcaagctcgaggcgcaggtcaaagacttgagccagaagcag
acgactgcaggtctgtcaagaggcatcgacgctgttcaggcagatatgaagaaaataact
gatgagagtcgaaacgcaagaaatgcgctggaccagcttacatccgagcgagacaagtcc
cggaacctcatcacgactctcgagctcagaatccgcgatatcaacgctgatcttaacaac
gcacagtcgaaactgaaggagaagcgagctctatctgagcggatcgaggagctgaggaca
gaaagcagcaaccagcgcgaaaccatgcgcgggtttgacagagatgttgaaatcgttgtt
cctgagattgagcaggctcaatacaagtacgacgatatcaaccgccgaggcaacgagaag
gtccaacgcgcgcacgatgaagcctccaagctttctgacagcgttcgccagcttacccaa
gccgacggggagatcaacgcctacatcgaccgcggcggtccgcaacaactcgcacgcaca
caccgggacattgaaaacctgcaaggcgaaatcgcccgcatcgaatccgagatgatggaa
gttacacgcaaggtcaagaaaatcgaagacaccatgcgcgacacagaaatgaccaagcgc
tcaatctccgacaacctgcggtaccgcaaggcgaaacgtgccctggagactcttcaaata
gagattgagaaactcgaagagcatggcgctgagcgcgacaaggaccactatgagcgcgaa
gcgcaacactgggacacacgctatcaccaactcaacacgtccaagacatcagtagaacgc
gatatgaagaacaaggacgaccagcttaccgagctcatggaagagtacaagtcgctgtac
gagaaggccgcaaacggttaccgagaggcccacatcaaagtcgaaaccacaaaggccgca
atcgaagacctcggacgctacgcgggcgccctagacaaagcaatcatccaataccacgcg
ctgaagatggaggaaattaaccgcatcatcgccgagctctggcgcaacgcgtaccaaggc
accgacgtagacacgatccgcattgccggcgactcagacgccaaaggcaacagcttgtac
aactaccgcgtcgtaatggtaaagcaggacacggagatggacatgcgcgggaggtgttcg
tcagggcaaaaagtgctcgccagcatcgtaatccggctcgcgctcgcagagtgcttcggc
acaaactgtggccttattgccctcgacgaacccaccaccaacctcgaccagcagaacatc
cagggcctcgcccagagcttgtcccacatcatccagatgcgccgcaagcaggccaacttt
cagctcctcgtcatcacccacgacgagcagtttttgcgtgaaatgaactgcgctgattac
accgatgtctactggcgagtcggccgcgatgcgagccaggagagcttcattgagaggcag
aacattgctgaggtgagttga

DBGET integrated database retrieval system