Amycolatopsis rhabdoformis: VSH64_43400
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Entry
VSH64_43400 CDS
T09694
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00860
Porphyrin metabolism
arhd01100
Metabolic pathways
arhd01240
Biosynthesis of cofactors
arhd03030
DNA replication
Module
arhd_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
VSH64_43400
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VSH64_43400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arhd03032
]
VSH64_43400
Enzymes [BR:
arhd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
VSH64_43400
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
VSH64_43400
DNA replication proteins [BR:
arhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
VSH64_43400
BRITE hierarchy
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
ExoX-like_C
His_Phos_2
Motif
Other DBs
NCBI-ProteinID:
WSE29576
LinkDB
All DBs
Position
9307773..9308927
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AA seq
384 aa
AA seq
DB search
MTDRVVVEADGGSRGNPGPAGYGAVVKDAATGEVLAERHEYLGVVTNNVAEYSGLIAALT
AAAETGASTVDVRMDSKLVVEQMSGRWKIKHAALQPLAARARELADGFDRVTYMWIPRAE
NSHADRLANVAMDSGTGKAPAATPATAAKPQVKTTAGTGEADRVAKAGWTGARGTPTRLL
LLRHGQTAMSVDRRYSGRGDVSLTERGQGQAAAAAKRLAAWPGLVGDDGEVAPIVSSPLT
RTKQTAQAVADALGTRFVTHPGLIETDFGQWEGLTFKEAAERDPELHSCWLRDSSCAPPG
GESFDAVHERVGQARRDLIEQYEGRTIIVVSHVTPIKTLLRMGLDAGPSLLFRLHLDLAS
LSIVEFYPDGNSSVHLANDISHLS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcgggtcgtcgtcgaggccgacgggggttcccggggcaacccgggcccggcg
ggctacggcgcggtcgtgaaggacgccgccaccggcgaggtgctggccgaacggcacgaa
tacctcggcgtggtcaccaacaacgtcgcggagtactccgggctcatcgcggcgctcacg
gcggccgcggagaccggtgcgtccactgtggacgtgcggatggactcgaagctggtcgtg
gagcagatgtcgggccgctggaagatcaagcacgccgcgctgcagccgctcgccgcgcgg
gcgcgtgaactcgcggacgggttcgatcgtgtcacctacatgtggatcccccgcgccgag
aactcccacgccgaccgcctcgccaacgtcgccatggacagcggcaccggcaaagccccg
gccgcgacaccggcaaccgcggcgaagccgcaggtcaagaccactgccggcaccggcgag
gccgaccgcgtggccaaggccggctggaccggcgcgcgcggcacgcccacgcgcctgctg
ctgctgcgccacggccagacggcgatgtcggtggaccgccgctactcgggccgcggcgac
gtgtcgctcaccgagcgcgggcagggccaggcggccgcggcggcgaagcggctggccgcg
tggccggggctcgtcggcgacgacggcgaggtggcccccatcgtctcctcgcccctgacc
cggacgaagcagaccgcgcaggccgtggccgatgcgctcggtacccgcttcgtcacgcac
ccgggcctgatcgagaccgacttcggccagtgggagggcctcaccttcaaggaggccgcc
gaacgcgaccccgagctgcacagctgctggctgcgggattcctcctgcgcgccgcccggc
ggcgagagcttcgacgcggtgcacgagcgcgtgggccaggcccgccgggacctcatcgag
cagtacgagggccgcacgatcatcgtggtcagccacgtcacgcccatcaagacgctgctg
cggatgggtctggacgcgggcccgagcctgctgttccgcctgcacctggacctggcgtcg
ctgtcgatcgtggagttctacccggacggcaactcgtcggtgcacctcgccaacgacatc
tcgcacctttcctga
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