Arthrobacter sp. YN: CGK93_01640 Help Entry CGK93_01640       CDS       T05171                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism arn  Arthrobacter sp. YN Pathway arn03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:arn00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     CGK93_01640  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:arn03400]     CGK93_01640 Enzymes [BR:arn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      CGK93_01640 DNA repair and recombination proteins [BR:arn03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      CGK93_01640 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_ligase_A_M LigD_N DNA_ligase_A_C DNA_primase_S Oxidored_nitro Motif Other DBs NCBI-ProteinID:  ASN18559 UniProt:  A0A221NF19 LinkDB All DBs Position complement(350510..353068) Genome browser AA seq 852 aa AA seqDB search MAGKQQERVNVEGHELTLTNLGKIIYPETGTTKAEVLEYYAAVAPFLIPAAANRPVTRKR WVNGVGTAENPGEVFFQKNLEDSAPRWIPRAAIQHSDHANVYPMVNNLATLTWMAQIASL EIHVPQWQVDPSGKPLRPDRFVLDLDPGPGAGLPECVEVAKLARSILQDMGMDPVPVTSG SKGIHLYTGLDGTLKSEQVSAFAKELARALESDHPELVVSDMKKSLRHGKVLVDWSQNSG NKTTIVPYSLRGKARPTVAAPRTWRELTSASLEHLDFLAVMKRVKTGKDHFAPISERHLP PHGEDEKDDDGAPAGSSGTGSSPGTSRERVVTVENRLAKYVGMRDPGKTPEPFPSSSAVS AFPLTGGSSSDQPEPGDPPPPGGIFVIQEHHARRYHLDFRLERDGVLVSWALPRGVPETP NRNNLAVHTEDHPMDYANFAGVIPKGEYGAGTVSIWDRGDYTCEKWRDGKEVIATLTGEP GGGLGGTKRFALINTGQNWLIHLMKEQPGRRRGGASTAKAVTPQSQPTAPQPPPNYTPML ATSGTTADLHGDDWLYELKWDGIRAIITGTEGRIRLMSRNGNDLTATYPELTDRACWPDG DFVADGEIVALGKGSRPDFGRLQLRMNLVKAADIQRARAAVPVQLMLFDLLYDDGTDLSG LSFRERREKLSGFAERLPQGCPLHLSAVLDHDVEDLMASAAELGLEGVMAKKADGRYVIG RRSRSWLKLKLEQSQEVVVGGWRPGAGARSGTFGSLLLGIPDGDKLHYVGRVGSGFKDWQ LRDIMEVLEPRAVTESPFADIPREDAAGATWVSPELVAEVTFGEWTGPGRLRHPVWRGWR PDKSPEDVSQPN NT seq 2559 nt NT seq  +upstreamnt  +downstreamnt gtggcaggcaagcaacaggagcgcgtgaacgtggaaggccacgagctcaccctcaccaac ctggggaaaatcatctacccggagaccggcaccaccaaggccgaagtgctggagtactac gccgccgtcgctcctttcctcattcccgcggcggccaacaggccggtgacgcgcaagcgg tgggtcaacggagtgggcacagctgagaatcccggggaggtgttcttccagaagaacctt gaggactccgccccccggtggataccccgggccgccattcagcattcggaccacgccaac gtttaccccatggtcaacaacctggccacgttgacgtggatggcccagatcgcctcgttg gaaatccacgttccgcagtggcaagtggatccttcagggaagccgctccgccccgaccgc tttgttttggacctggaccccgggcccggagcgggactgcccgagtgcgttgaggtggcc aagctggcccgctccatcctgcaggacatgggcatggaccctgtccccgtcaccagcggc agcaagggcatccacctctacacgggcctggatgggacccttaagtccgagcaagtgtcc gccttcgccaaagagcttgcccgcgccctggagtccgaccaccccgagctggtggtcagc gacatgaaaaagtccctccgccacggcaaggtgctggtggactggagccagaacagtggg aacaaaaccaccatcgtcccctactcactccgcggcaaggcgcgccccaccgtggcggcg ccgcgcacgtggcgtgagctgacctccgcctccttggagcacttggatttcctggccgtg atgaagcgtgtcaagacgggcaaggaccacttcgcaccgatttccgagcggcaccttccg ccccacggtgaggatgagaaggacgacgacggtgctcccgcaggcagttcgggcacgggc agcagcccgggtacctcccgcgagcgggtggtgacggtggagaaccgtctcgccaagtat gtcgggatgcgcgatccgggcaagaccccggagccgtttccgtcgtcgtcggccgtttct gccttcccgctgaccgggggctcgtcctcggatcaaccggaaccgggcgacccgccgccg ccgggcggcatctttgtcatccaggagcaccatgcccgccgctaccatctggatttccgg ttggaacgcgacggcgtcctggtgtcgtgggcactcccccgtggcgttcctgaaactcca aaccgcaacaacctggccgtgcacaccgaggaccatcccatggactatgccaacttcgcg ggcgtcatccccaagggcgagtacggcgcggggaccgtcagcatctgggaccgcggcgat tacacgtgcgagaaatggcgcgacggcaaggaagtcattgcgaccctcacaggcgagccg ggcggcggacttggtgggaccaaacggttcgcgctgatcaatacgggtcagaactggctg atccacctgatgaaggagcaacctggaaggcggcggggtggagcatccacagccaaagcc gtgacaccccagtcccagccgacggctccgcagcccccgccgaattacacccccatgctc gcaacctcaggcaccaccgctgacctccacggcgacgattggctgtatgaattgaagtgg gacggaatccgggcgatcatcacgggaaccgagggcaggatccgcctcatgagccgcaac ggaaatgacctcacggccacatacccagaactgacggaccgcgcatgctggcccgacggc gacttcgttgctgatggcgagatcgtggcgctcggcaaaggatcacggcctgatttcggc cggctgcaactccggatgaacctggtcaaagctgcggacatccagcgggcacgggcagcg gtcccggtgcagctcatgctgttcgaccttctgtacgacgacggcacggacctgagcggc ctgtctttccgagagcgtcgcgaaaaactctcggggtttgcggagcgcttgccccaaggc tgcccgctgcatctttcggcggttctggaccatgacgtagaggatctcatggccagcgcc gccgagctgggcttggagggcgtgatggcgaagaaagccgacggccgttatgtgatcggc cgccgcagcaggtcctggctcaagctcaagctggagcaaagccaggaagtggtggtgggt ggctggcgtcccggtgccggggctcgaagcgggacgttcggttccctcttgttgggcatc ccggacggcgacaagctgcactatgtgggcagggttggcagcggattcaaggactggcaa ctgcgggacatcatggaggttctggagccccgcgcggtgaccgaatcccccttcgcggac atcccccgtgaggacgcggcaggtgccacgtgggtcagccctgagcttgtggcggaggtg accttcggggaatggacggggcccggccggctgcggcatcccgtgtggcgtggctggcgc cccgacaagtcccctgaggacgtaagccagcccaactga

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