Arsenicicoccus sp. oral taxon 190: ADJ73_02895
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Entry
ADJ73_02895 CDS
T04014
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ars
Arsenicicoccus sp. oral taxon 190
Pathway
ars03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ars00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ADJ73_02895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ars03400
]
ADJ73_02895
Enzymes [BR:
ars01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
ADJ73_02895
DNA repair and recombination proteins [BR:
ars03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ADJ73_02895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
AKT50518
UniProt:
A0A0K1F7L0
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All DBs
Position
1:complement(616909..617790)
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AA seq
293 aa
AA seq
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MAESADHVRVEVDGRTLRLSSLDKVLYPETGTTKAQVISYYAQVAPLLLEQLRDRAVTRI
RWPSGTGGPSFFEKNLPRGAPSWIRTVTLPAPGSTKARETITYPIIDSVAGLTWLANLAA
LELHVHQWRVSPSGEALHPDRLVVDLDPGPGAGLAECSQVALWARDILCDMGIQELWPVT
SGSKGLQLYAELDGSHPVAVVREVAQGLAVALEAAHPRLVVSSMVKAKRGGKVLVDWSQN
TASKTTICPWSLRGKLGRPTVAAPREWTELEDAASGRALLEQLSLDDALSRMA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtccgcggaccacgtgcgggtcgaggtggacgggcggacgctgcggctgagc
tcgctggacaaggtgctctaccccgagaccgggacgaccaaggcccaggtcatctcctac
tacgcgcaggtggcgccgctgctgctcgagcagctgcgcgaccgggcggtcacccgcatc
cgatggccctcggggacgggcgggccatcgttcttcgagaagaacctgccccgcggcgcg
ccctcctggatccgcacggtgacgctgcccgcgcccggctcgacgaaggcccgcgagacc
atcacctacccgatcatcgactccgtcgcggggctgacgtggctggccaacctggccgcg
ctcgagctgcacgtccaccagtggcgggtgtcgccgtcgggggaggcgctgcacccggac
cggctggtcgtcgacctcgacccggggccaggcgcggggctggccgagtgctcccaggtg
gcgttgtgggcgcgggacatcctgtgcgacatggggatccaggagctgtggccggtcacg
tcgggctccaagggactccagctgtatgccgagctcgacggcagccaccccgtcgccgtg
gtgcgcgaggtggcccaggggttggcggtggcgctcgaggcggcccaccccaggctggtg
gtgtcgtcgatggtcaaggccaagcgcggcggcaaggtgctggtcgactggagccagaac
accgcctccaagacgaccatctgcccgtggtcgctgcgggggaagctcggccggccgacg
gtggcggcgccgcgggagtggaccgagctggaggatgccgcgtcggggcgggcgctgctc
gagcagctgtccctggacgacgcgctgagtcggatggcttga
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