Arthrobacter sp. PAMC25564: E5206_01825 Help Entry E5206_01825       CDS       T06052                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism artp  Arthrobacter sp. PAMC25564 Pathway artp03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:artp00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     E5206_01825  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:artp03400]     E5206_01825 Enzymes [BR:artp01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      E5206_01825 DNA repair and recombination proteins [BR:artp03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      E5206_01825 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S DNA_ligase_OB_2 Motif Other DBs NCBI-ProteinID:  QCB98799 UniProt:  A0A4P7SVV7 LinkDB All DBs Position 402484..404970 Genome browser AA seq 828 aa AA seqDB search MAGRELTVSNLDKVMYPETGTTKGDVLAYYAAVAQVLIPAAANRPATRKRWVHGVGTAAA PGEMFFQKNLDESTPGWVPRASIRHKERTNQYPLVNDPATLAWLAQIAALEIHVPQWRVD SHGNAMPPDRMVLDLDPGEGAGLAECAEVARLARAILRDVGLDPVPVTSGSKGIHLYAAL DGTRSSEQISEFAHELARALESDYPELAVSDMKKTLRSGKVLVDWSQNSAAKTTIVPYSL RGRLKPMVAAPRTWRELSSPSLHQLDYREVMRRVKAGKDPFAVISGGTRHGGHPDAAASN RGGGGQEEDQTGGHAEGPGDGGDADPRLELYRSKRDAAGTPEPFTAERHDGEADGGTQRE KFVIQEHHARRLHHDFRLERDGVLVSWALPRGVPTSKTQNHLAVQTEDHPMDYADFEGTI PKGQYGAGTVSIWDHGYYECEKWVAGKEVIATLTGADDGGLGGTRRFALIHTGQGNDQWL IHLMDPPGQAKGHTAAPATAGAGRSEPAAGSAEFRPMLASSGTTADLAGKDWQFELKWDG VRALIVGDAGKIRLISRNGKDMSATYPELTDRICWPERDFTADGEIVAVGPSGRPDFGLL QGRMKLTKPDDVAKALSSTPVRLMLFDLLSDGGEDLRRLPLRDRRPRLERFFRHSACPVE LSGLVAGDARYILESAAELGLEGVMAKRTDGRYVGQRSRSWLKLKLERTQEVVVGGWRPG KGEREHSVGSLLLGIPEGARLRYVGRVGTGFSTRELKELRQQLDAMPRKTSPFGEVPAAD AADAQWVRAKLVGEVSYAEWTGSGKLRHPVWRGWRLDKAPADVVMEPG NT seq 2487 nt NT seq  +upstreamnt  +downstreamnt atcgccgggcgcgaactgaccgtgagcaacctcgacaaggtgatgtatccggaaacgggc accaccaagggcgacgtcctggcctactatgccgccgtggcgcaggtgctgatcccggcc gccgccaaccggccggccacgcggaagcgctgggtgcacggggtgggcaccgcagcggca ccgggcgagatgttcttccagaagaacctggacgagtcgacgccgggctgggtgccgcgc gcctcgatcaggcacaaggagcgcaccaaccagtacccgctcgtcaatgacccggccacg ctggcctggctcgcgcagatcgccgccctggagatccatgtgccgcagtggcgcgtcgac tcgcacgggaacgcgatgccaccggaccggatggtcctggacctggatccgggcgagggt gcgggtctggccgaatgcgcggaagtcgccaggctggcccgcgccatcctgcgggacgtg gggctggacccggtgccggtgacgagcggcagcaagggcatccacctctacgcggcgctg gacgggacccgcagttcggaacagatttccgagttcgcccatgagctggcaagggccctg gagtccgactatccggagctggcggtgagcgatatgaagaagacgctgcgcagcggcaag gtactggtggactggagccagaacagtgccgcgaaaaccaccatcgtcccgtattccctc cgcgggcggctgaaaccgatggtggcggcaccccggacctggcgcgagctcagctccccc tccctgcaccagctggactaccgggaggtgatgcggcgggtgaaggccgggaaggatccc ttcgccgtgatctccgggggcacccggcacggcggccatccggacgcagccgccagcaac cggggcggcggcgggcaggaggaagaccagacgggcggccacgcggaaggcccgggcgac ggcggcgacgcggacccacgcctggagctgtaccgcagcaaacgggacgcggccggcacc cccgagccgttcacggcggaacggcacgacggcgaggctgacggcggcacgcagcgggaa aagttcgtgatccaggagcaccatgcccgccggctgcaccacgacttccggctggagcgc gacggcgtgctggtgtcctgggccctgcccaggggcgtccccaccagcaagacgcagaac cacctcgcggtccagaccgaggaccacccgatggactatgccgacttcgagggcaccatc ccgaaaggccaatacggcgccggcacggtcagcatctgggaccacggttactacgaatgt gaaaaatgggtcgccggcaaggaagtcatcgccaccctcacgggagcagacgacggcggc ctgggcggcacgcgcaggttcgccctgatccacaccggccagggcaacgaccagtggctc atccacctgatggacccgccagggcaggcgaaggggcacaccgctgcgccggccaccgcc ggcgcgggccgatccgaaccggccgccggttccgcggagttccggccgatgctggccagt tccgggaccaccgcggacctggctggcaaggactggcagtttgaactcaagtgggacggg gtgcgcgcgctgatcgtcggcgacgccgggaagatccgtctcatcagccgcaacggcaag gacatgtccgcgacgtacccggagctgaccgaccgcatctgctggcccgaacgggacttc accgccgacggcgagatcgtcgccgtcggaccctccggccggcccgatttcgggctcctg caagggcggatgaaactcaccaaaccggacgacgtcgccaaggcgctgtcctccaccccc gtgcggctgatgctgttcgatctgctgtccgacggcggcgaggaccttcgccgactgccc ctgcgggaccgccggccccgcctggagaggttcttccggcactcggcttgcccggtcgag ctctcaggactggtcgccggcgacgccaggtacattctggagagcgccgcggagctgggg cttgaaggggtgatggccaagcggacggacggccgctacgtcgggcagcgcagcaggtcc tggctcaagctcaagctcgaacgcacccaggaggtggtggtcggcggctggcgcccgggg aagggcgagcgggagcactccgtagggtcactcctgctcggcatccccgaaggcgccagg ctgcggtacgtggggcgggtgggcactggcttcagcacccgtgaactcaaggaactccgg cagcagctcgatgccatgccgcggaagacctcccccttcggcgaggtgccggccgctgat gccgcggacgcccagtgggtgcgtgccaagctcgtcggggaagtgagctacgcggaatgg accggaagcggcaagctccggcacccggtgtggcgtggctggcggctggacaaggcaccg gccgacgtggtgatggagcccggctga

DBGET integrated database retrieval system