Agrobacterium rubi: G6M88_03450
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Entry
G6M88_03450 CDS
T08058
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
arui
Agrobacterium rubi
Pathway
arui03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G6M88_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arui03400
]
G6M88_03450
Enzymes [BR:
arui01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
G6M88_03450
DNA repair and recombination proteins [BR:
arui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G6M88_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QTF99514
LinkDB
All DBs
Position
1:complement(717622..719106)
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AA seq
494 aa
AA seq
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MYRVSLEGRGDFGEWRDAARAFLSANVAPHEIEWRFRGEETGLFGFEEGDRVPQAAGGAS
VNVPAVFMPFAQTIICHSDPTRFALLYRLLWRLGQDRALLEFKSDPDVAEARKMEKSVRR
DSHKMTAFVRFKEMPLPQDGVGRRQFIAWFEPDHFIVERKAAFFQRRFTDMDWLILTPKG
SARWDGETLETSRLSAEQPDLSDETDELWRTYYANIFNPARLKIKAMTAEMPKKYWKNLP
EADLIPDLILNAERRVLEMGAKAATEPQLFHHRLQAAADSKPVPTLPDADTLEGLKHEAE
GCTLCPLHCKATQTVFGEGPANADVMIVGEQPGDVEDLAGRPFVGPAGKVFDQVLGETGL
DRRAMYVTNAVKHFKYEARGKKRIHQRPDAGEVQRCRWWLTREIDLVQPKLIVAMGATAV
FALTELREKLSDLRGKPMPLEGDRMLFITVHPSYLLRIPDEQKKREEMQKFRKDMQAVHR
LMETAQAVPAIVSS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgagtgtcgctggaggggcggggggattttggtgagtggcgggatgctgctcgc
gccttcttatcagcgaatgtcgcgccgcatgagatcgaatggcgatttcgtggcgaagag
acgggcctcttcgggttcgaggagggagatcgcgttccgcaggccgctggtggcgcaagc
gtgaatgtgcctgcagtcttcatgccgtttgcgcagaccattatttgtcacagcgatccg
acccgctttgcgctgctgtatcgtcttctgtggcgtttggggcaggacagagccctgctg
gagttcaagtccgaccccgatgtggccgaagcgcgaaagatggagaaatccgttcgtcgc
gatagtcataagatgacggctttcgtgcgcttcaaagagatgccattgccacaggatggt
gtcggacggcggcagttcattgcgtggttcgagccggatcacttcatcgttgagcgcaag
gcggccttcttccagcggcgcttcacggatatggattggttgatactgacgccaaagggt
tctgcgcgttgggacggagagacactggaaacgtcacgcctttccgcagagcagcccgat
ctctcagacgagaccgatgagctttggcgcacctattacgccaacatcttcaatccggcg
cgactgaagataaaggcgatgacagcggagatgccgaagaaatactggaagaacctgccc
gaggcagacctcattccagacctgatcctcaacgccgaaagacgtgtgctggagatgggt
gccaaggctgcaaccgagccgcaacttttccaccatcgtcttcaggccgctgctgacagc
aaacctgtgcccacgttgcccgatgccgatacgttggaaggattgaagcacgaggcggaa
gggtgcacgctctgtccgctacattgcaaggccacgcaaaccgtgttcggggaggggcca
gccaatgctgacgttatgatcgtcggcgagcagccgggcgatgtcgaggatttggctggg
cgtccttttgtcggtcctgcgggcaaggtgttcgatcaggtactgggcgagaccggcctg
gatcgcagggcgatgtacgtcaccaatgccgtcaagcacttcaaatacgaggctcgcggc
aagaagcgcattcaccagcgccctgatgctggcgaggtgcagcgttgtcgctggtggctg
acgcgcgagatcgatctggtgcagccgaagcttatcgttgccatgggtgcgacggccgtc
tttgccttgaccgaattgagagaaaaactgtcggacctgcgtggaaagcctatgccgctg
gagggcgacaggatgctgttcatcaccgttcacccatcctatctgttgcgcattccggat
gaacagaaaaagcgggaagagatgcagaaattccggaaggatatgcaggcggttcacaga
ctgatggagacggcacaagccgtccccgccatcgtgtcaagctga
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