Acipenser ruthenus (sterlet): 117416570
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Entry
117416570 CDS
T07327
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117416570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117416570
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117416570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
117416570
NCBI-ProteinID:
XP_034780787
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All DBs
Position
11:complement(18171330..18226279)
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AA seq
1267 aa
AA seq
DB search
MATDITSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRHIENRLWQRDYRDLRVIQPDAGYYNDLVPPVGMLKNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFQRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLPTLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDVRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
TGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
SGMSEDGVEYDDIEPSSMAAIPGMGIPEQLKMAMEQEQTGKEELDEVEMTIPGLDWGVEE
MTLKDLKKVPQKKVPYAKPIPAQFQQAWAENKVPALPPGEVPKERKDEKKVDLKKKTQAE
IEQEMAALQYTNPLLLEQMKIERMAQKQSEQGPPPPHGAMPPFPGQGPMPTPLQGFQPSL
LPQQMPPNMPPMGPTGPLGPFIPPGQMDPPGPQHHQGPPGPQGFIGPQDMHGPQGMQRHP
GPQGHMGHQGPPGMSGKGMHGPPGMPPGPRGMPGPPPGGMQGPPGGMMDPPPRGMGPQNN
QGPHPQGGMMGPQDMRMPQTQGGMMGHPPPQDMRGHPGPPMQGSMMGPPSIGPQGQQNPP
RVAQGLHGHSNMQGPGGMHGPGNMQGPGHMPGPGNMQGPGTLQGPPPFMQQGKPPLLGEG
PRPPFSQGGQTQGPPPLMSGLVQQGPGPNSKGDSRGPPNHHMGGSLDRRGPEGGMGPDQG
SERGASYWGESRDSNRGPAPEFEGLDERFHPQGGEGWRQQPTQQPQRGQNQEFRDGDGRG
HHRGGPQGGWEGRRHSEEKFPRDGEDPRYRGRREERFDNYEAPREEFDPQQQQQRSREQQ
RPGRHSQEFEHEQADESSDVSKAGLFPGRFHRGGASRQEGRGGRGYSEQFVGKDFEEEKG
RGWDTGGRGRGRGTQRGGGRKGLLPTPDEFPPHFEGGRKPESWEGTRDQGNEHFRDGLRP
EHSARDSASPASRERSSSLQGMDMASLPPRKRPWHDGPGTADHRERDSPGGASEERPAVR
GGGSSQRNLKRSSSQDWEHHREEAGYTRGGGGRGGPGWGRGGGGNMNSSSQPRRGPSRGS
SRGARGR
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatatcacctccccgccccggttcttccacatgccgcggttccagcaccag
gctccacggcagctcttctacaagcggcccgactttgcccagcagcaggccatgcagcag
ctcacctttgacgggaagcgcatgagaaaggcagtgaaccgcaaaaccattgactacaat
ccttccgtcattcgccacatcgagaatcgtctgtggcagagagactatcgagatctcaga
gtcatccagcctgatgctggctattacaacgatcttgttcctccagtgggaatgctgaaa
aaccccatgaatgcagtcaccaccaagtttgtcagaacttctaccaacaaagtcaagtgc
cctgtttttgtcgtccggtggacccctgaaggcaggcgcctggttactggagcctccagt
ggagagtttacactatggaacggactgaccttcaactttgaaaccattctacaggcccac
gacagccctgtgcgagccatgacctggtcccataatgacatgtggatgctgacagcggac
catggaggctatgtgaagtactggcagtccaacatgaacaacgtcaagatgttccaggcg
cacaaggaggcgattagagaggccagtttctcacccacggataataaatttgccacttgc
tctgatgatggaactgttcgcatctgggactttcagcggtgccatgaggagagaatcctg
cgagggcatggagcggatgtgaagtgtgtggattggcatcctacaaaagggttggtggtt
tcagggagcaaagatagccagcagccaatcaagttctgggatccaaagacaggacagagc
cttccaacattacatgctcacaagaacaccgtcatggaggtgaagtggaatctgaatggt
aattggctgctcactgcatcacgtgaccacctgtgtaagctgtttgatgtgcgcaaccta
aaggaggagctacaggtcttccgggggcacaagaaggaggctacagccgtggcctggcac
ccggtacatgagggcctctttgccagcggaggctctgatgggtccctgctcttctggcac
actggtgttgaaaaggaggtggggggcatggagatggcccatgaagggatgatttggagc
ttagcctggcacccactgggtcacattctttgttctggatccaacgaccacactagtaaa
ttctggactagaaatcggcccggggataagatgagggaccgatacaacttgaacctctta
tcaggaatgtcagaagacggggtggagtatgatgacattgagcccagcagtatggctgcc
atcccaggaatggggatcccagagcagttgaagatggccatggaacaagagcagactggt
aaggaggagctggatgaagtggagatgacgatccccggtctggactggggggtggaggag
atgacgttgaaggatctgaagaaagttcctcagaagaaagtgccctacgccaagcccatc
ccagcacagttccaacaggcctgggcagagaacaaggtgccagcgctgccccccggggag
gtcccgaaagagaggaaggacgagaagaaggtagacttgaaaaagaaaacacaagcagaa
attgagcaagaaatggcagccctacagtacaccaacccgctactcttagagcaaatgaag
attgaacggatggcacaaaagcaatcggagcaggggcctccccccccgcatggtgctatg
ccccccttcccaggtcaagggcccatgcccactcctctacaaggcttccagccatccctc
ctgccacagcagatgccccccaacatgcctcctatgggtcccactggcccactgggacct
ttcattcccccgggacaaatggacccacccggaccccagcatcaccagggccccccaggc
ccacagggcttcattgggccccaggatatgcatgggccccagggcatgcagaggcaccca
ggtcctcaagggcacatggggcatcaggggccaccagggatgtctggcaaggggatgcat
gggcctcctggaatgccccctggaccgagagggatgcctggaccgcccccggggggaatg
cagggacctccaggaggcatgatggatcccccaccccgtggaatggggccacaaaacaat
caaggaccccatccccaaggaggcatgatgggcccccaggacatgagaatgcctcagaca
cagggaggtatgatgggccaccctccaccacaggacatgagaggccaccctggaccaccc
atgcaggggtcaatgatggggcctccttctattgggccacagggacaacagaaccccccc
agggtagcccaaggcctgcacggacacagcaacatgcagggacctgggggcatgcatggg
cctgggaatatgcagggtcctgggcatatgccagggccaggaaacatgcaaggacctggc
actttgcaggggccacccccgttcatgcagcaaggcaagccgcccctgttgggtgaaggg
cccagaccaccgttcagccaggggggacagactcaagggccgcctccattgatgtctgga
ttggtgcagcagggaccaggccccaacagcaaaggagactctcgcggccccccaaaccac
cacatgggaggatctctggatcgtcggggccctgaagggggtatgggtccagaccagggc
tcagaaaggggagcctcttattggggggagtctcgtgacagcaatcgaggcccagcccct
gaatttgagggtctggatgagcggttccacccgcagggaggggagggctggcggcagcag
cccacgcagcagccccagcgtggacagaaccaagagttccgtgacggggatgggcggggc
caccacagagggggcccccaaggtggctgggagggccgacggcactctgaagagaagttt
ccacgtgacggcgaggatccacgatacaggggccgtcgagaagaaaggtttgataattat
gaggcaccccgtgaggaattcgacccacagcagcagcagcagcgatcaagagagcagcag
aggcccggaaggcacagccaggagtttgagcacgagcaagctgacgaatcgtctgacgtg
agtaaagcaggcctgtttcctggcaggttccacagaggcggagcctctcgacaggagggt
cgaggtgggcggggctactcagagcagtttgtcggcaaggatttcgaggaggagaaagga
aggggttgggatactggaggaagagggcgtggccgcggaacacaaagaggaggagggcgg
aagggtctgcttcctactccagatgagttcccgcctcatttcgaaggtgggcgcaaacct
gaatcctgggaaggaacacgagatcagggcaatgagcacttccgggatggcttgcgccca
gagcactctgcccgggacagtgcctccccggccagcagggagcgctcctcctctctgcag
ggcatggacatggcttccctccctcctcgcaagagaccctggcacgacgggcccgggaca
gcggaccacagggaacgagattccccaggaggggcttctgaggagaggcctgcagttcga
ggaggcggctcttcccagcgcaacttgaagcggtcaagctctcaggactgggagcaccac
cgtgaggaggccggctacacccgtgggggaggaggccggggcgggcctggctgggggaga
ggaggaggagggaacatgaacagctccagccaaccacggcgaggtccgtcacgtggatct
tcgagaggggcgcgaggccggtag
DBGET
integrated database retrieval system
