Acipenser ruthenus (sterlet): 117432036
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Entry
117432036 CDS
T07327
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03420
Nucleotide excision repair
arut04115
p53 signaling pathway
arut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117432036 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
117432036 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
117432036 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117432036 (ddb2)
03400 DNA repair and recombination proteins [BR:
arut03400
]
117432036 (ddb2)
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
117432036 (ddb2)
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117432036 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
117432036
NCBI-ProteinID:
XP_033909327
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All DBs
Position
23:complement(13452148..13459444)
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AA seq
516 aa
AA seq
DB search
MAKKKMLLAVPEPECKKERTAPGRRKKEGQCPEEPSSKKLKVNKTRTPGKAVTRNRHQTT
PGCTESAQTAKQRSIIHYINMNALGQSIHAQLRQCLQQPFVRSLASYKLFRTASPFNRRV
TSLEWHPTHPSTVAVGSKGGDLILWNYDVLNKTCFIQGKGAGDFIGGMKFSPTNPSQVYT
ASGDGTLSLQEFGGRTAQIISSTSDCWHDHHNVCLWYCSLDVSASRQVVVAGDNVGNTVL
LSADGKEIWNLRLHKKKVTHVEFNPRCDWLLATASVDQTVKIWDMRHIKDKNSFLHELPH
NKPINSAYFNPTDGSKLLTTDQYDEIRVYSSADWSKPQHTIRHPHRHFQHLTSIKATWHP
LYDLIVAGRYPDLQHADELRTIDVFDANTGGLACQLHNPNAPGIISLNKFNPMGDTLASG
MGFNILIWSREEMVTSKQETLLKMMQEQGIGADTSRGQRGPQRRPRGEGSGNAELGKLKK
KLASLESAGVSTKTKIKTKENTKPQKEKQKKKHLQD
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaaaaatgctattggcagtacctgaacccgagtgcaagaaagagagaacc
gctccaggaaggaggaaaaaggagggacagtgcccagaggaacccagctccaaaaaactg
aaggtgaataaaacaaggacacccgggaaagcagttacaagaaatagacaccaaaccact
ccaggatgcacagagtctgcccaaacagccaaacagagaagcattattcattacattaac
atgaatgcactggggcaaagcattcatgcacagctgcgacagtgtctccagcagccgttt
gtgcgctccctggcttcctacaagctcttccggacagccagccccttcaaccgcagagtg
acaagcctggagtggcacccgacgcaccccagcaccgtggctgtgggctccaaaggtgga
gacctcattctgtggaactatgacgtgttaaacaagacctgcttcatccaagggaaagga
gcaggagattttattggggggatgaagttcagtcctaccaacccatcccaagtctacacc
gcgtctggcgacggcactctgagcctgcaggagtttggtggtagaacagctcagataatc
tcaagcacttcagactgctggcacgatcaccataatgtttgtttgtggtactgcagcctt
gacgtctccgcaagcagacaggtggtggtggcgggagacaacgtgggaaacaccgtcctc
ctgagcgcagatggcaaagagatttggaatctcagactgcacaagaagaaggtgacccac
gtggagtttaaccctcgctgtgattggctgctagcaacggcttcagtagaccaaacggtt
aaaatctgggacatgcggcatattaaagacaagaacagtttcctgcacgagcttcctcat
aataaaccaatcaattcagcctatttcaatcccacggatggttccaagctacttaccaca
gaccagtatgatgagatccgggtatactcctctgctgattggtctaaacctcagcacact
atacggcacccacacaggcatttccagcacctaacgtctatcaaggctacctggcatccg
ctatatgacctgatcgtagcagggcgctacccagatctccagcacgctgatgagttgaga
accatcgatgtgttcgacgccaacacaggagggctcgcgtgccagctgcacaatcccaac
gctccaggaatcatctctcttaacaaatttaatcccatgggagacacactagcatcagga
atgggatttaacattctgatttggagccgtgaagaaatggtgaccagcaagcaggaaact
ctgttgaaaatgatgcaagagcagggtatcggggccgacacctccaggggacagagggga
cctcagcggcgcccccgtggggaaggtagtggaaacgcagaactgggcaagctgaaaaag
aagctggccagcctggagtcagctggagtgagcaccaagaccaagatcaagactaaggaa
aacaccaaaccacagaaagaaaagcagaaaaagaagcacttgcaggactaa
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