Aeromonas salmonicida subsp. salmonicida A449: ASA_2088
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Entry
ASA_2088 CDS
T00500
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03030
DNA replication
asa03430
Mismatch repair
asa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASA_2088 (dnaX)
03430 Mismatch repair
ASA_2088 (dnaX)
03440 Homologous recombination
ASA_2088 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asa03032
]
ASA_2088 (dnaX)
03400 DNA repair and recombination proteins [BR:
asa03400
]
ASA_2088 (dnaX)
Enzymes [BR:
asa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASA_2088 (dnaX)
DNA replication proteins [BR:
asa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASA_2088 (dnaX)
DNA repair and recombination proteins [BR:
asa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASA_2088 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_18
AAA_2
ResIII
nSTAND3
AAA_30
Rad17
AAA_19
TsaE
VapE-like_dom
Mg_chelatase
TniB
SKI
ERAP1_C
DUF815
Zeta_toxin
PIF1
AAA_24
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ABO90154
UniProt:
A4SMN2
LinkDB
All DBs
Position
complement(2219698..2222295)
Genome browser
AA seq
865 aa
AA seq
DB search
MSYQVLARKWRPHTFEQVVGQHHVLTALTNALDQGRLHHAYLLSGTRGVGKTTIARILAK
SLNCEQGISSHPCGVCDTCREIDQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPYVKFLLATTDPQKLPITILSRCLQFHLKSLDQ
TQIAKQLECVLDQEAQPFEPRALLALAKAADGSMRDALSLTDQALAHGNGSVRLESVLAM
LGTLDHRHLHQLLEAILRQDAAATMAKITEIATLGPDFDQLHAELEGLLHRVAMAQLLPA
TVQEQGADAESLLQLAQAMSPEEVQLCYQIVLGGRKDLPWAPDGRTSLEMTCLRMLAFSP
RREAVHPANLTVLPPSMAGGMGVAPAQLGKSRGADSAPTLATAIVAPPAAPGSVSVEHTA
TQMVPLVAHAVLETDEQEMASDALSAPLFVEQDELLREAQQMGYEAQPVMDAPSAPISTV
VAADEAMQHLPSDMAVAAEQPTEVPAEIVAESVVEPEAAPSAASSMQSLLGKRNLLRSRL
RSEPATAQAPRVAPIKPVAAPEGRPVAQPAVTPPSAPWQGAAVAPVHHSAPVTAYDELPP
LDAYDEGGSDYEEYLNQGFGESAASASMANVAQTAASGASAVPAYGQAAPAQAPTRARPN
PDDLPPWDLDGTPAARAQVAPAVSSAAPVMPQAVATSEPAPMVDSVMETIDWDELESDNQ
PEEGEEVARLIPSSLLVNCDDPWAELIARTGVGGRLRQLAINSVMTRQGDKVLLTLKPEQ
RHLVSDRARVDLAEIIGPELGQAVQVEVTLGTVPDQETPLEIEHRLYLGVREQVSRDLEQ
DPNVQFLRQRFGAVLHQESIEPLSS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcgcgtaaatggcgcccccatacgtttgaacaagtggtaggc
cagcatcatgtgctgaccgccttgaccaacgccctggatcaggggaggttgcatcatgcc
tatctgctcagcggtacccgaggggtcggcaagaccaccatagcccgcattctggccaag
agtctcaattgcgagcaggggatcagcagtcacccgtgcggcgtatgcgacacctgccgc
gagatcgatcagggcaactttgtcgatctgctggagattgacgccgcctcccgcaccaag
gtggaagatacccgcgagctgctcgataacgtgcagtaccgcccggcccgtggccgcttc
aaggtgtatctcatcgatgaggtacacatgttgtcgcgtcacagcttcaacgccctgctc
aaaaccctggaagagccgcctccctatgtgaagtttctgctggccaccacggatccgcag
aagctgcccattaccattctctcccgttgcttgcagtttcatctcaagagtctggatcag
acccaaattgccaagcagttggagtgtgtactggatcaggaagctcaaccgttcgaaccg
cgtgccctgctggccctggccaaggcggccgatggcagcatgcgcgatgccctgagtctg
accgatcaggcgctggcccatggcaatggcagcgtgcgccttgaaagcgtgctggccatg
ttgggcaccctggaccatcgtcacctgcaccagttgctggaggcgatcctgcgccaggat
gctgcggccaccatggccaagatcactgaaatcgctaccctgggccccgattttgatcag
ctccatgccgagctggaaggtctgctgcaccgcgttgccatggcacagctgttgcctgcc
acagtgcaggagcagggggccgatgccgagtctctgctgcaacttgcccaggccatgagc
ccggaagaggtgcagctttgttaccaaatcgtgctggggggacgaaaagatctgccttgg
gcaccggacggtcgcacctcgctggagatgacgtgcttgcgcatgctggctttctccccg
cgtcgtgaggccgtgcatcctgccaatctcacggttctgccaccctccatggcgggaggg
atgggagtcgcgccggcccagctgggaaagtcccgcggggctgactccgccccgacgctg
gccactgcgattgtggctccccctgctgcccccggatccgtgtcggtagaacataccgcc
acccagatggtgccccttgttgcgcatgccgtgctcgagacggatgagcaggagatggcc
agcgatgcgctgagcgcgccgctctttgtcgaacaggacgagttgctgcgcgaagcgcag
cagatgggctacgaggcgcagcctgtcatggatgcgccgagcgccccgatcagcaccgtt
gtggctgccgatgaggcgatgcagcaccttccttcagacatggcagtggcagctgagcaa
cccaccgaggtgccggctgagatagtcgccgagtcggtggttgagcctgaagccgcgccg
tctgccgcgtccagcatgcagagcctgctgggcaagcgcaatctgctgcgcagtcgattg
cgcagcgagcctgcgacagcccaggccccgcgtgttgcccccatcaaaccggtggctgcg
cccgaggggcgccctgtcgcgcagccagccgtcacgccaccatcagctccctggcaaggg
gcggctgtggcgcctgtccatcattcagcccctgtgacggcatatgacgaattgccgccg
ctggatgcgtatgatgagggtggcagcgactatgaagagtatctgaatcaaggctttggc
gagtctgctgccagtgcgtcaatggcgaatgtggcacagacggcggcttcgggagccagt
gccgtgcctgcctatggtcaggctgccccggctcaggcgcccaccagggctcgccccaac
cccgatgatctgccgccctgggatctggacggtacgccggccgcgagggcgcaggtagcg
cctgccgtgtccagtgccgcccccgtgatgccccaagcagttgctaccagcgagccagcg
cccatggttgactccgtgatggagaccatcgactgggatgagctggagagcgacaaccaa
cccgaggagggggaagaggtcgccagactgatcccgtcttccttgctggtcaattgcgac
gatccctgggctgagttgattgcccgtactggcgtcggtggccggcttcgccagcttgcg
atcaactctgttatgacccggcagggagacaaggtgttgttgaccctgaaacccgaacag
cgtcatctggtcagcgacagggcccgtgtcgatttggccgagatcataggccccgagctt
ggccaagccgtgcaggtggaggtgacactggggactgtgccggatcaggaaacccccctt
gagatcgagcatcgcctctatctgggggtgcgcgagcaggtgagccgggatctggagcag
gatcccaatgtgcaatttctaagacaaaggtttggcgccgtgctccaccaggagagcata
gagccgctgagcagttga
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