Alistipes shahii: AL1_20860
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Entry
AL1_20860 CDS
T02578
Name
(GenBank) Site-specific recombinase XerD
Organism
ash
Alistipes shahii
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_5
Arm-DNA-bind_5
Motif
Other DBs
NCBI-ProteinID:
CBK64403
UniProt:
D4IN91
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Position
complement(2362990..2364279)
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AA seq
429 aa
AA seq
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MEPNNKEIKRRSTFSLLFYINRTKVRKDGTCKLLCKVSIDAKSAPININAFVEPSLWNPE
TKRANGRSENARTVNLAIEKLTEKITGHYRHIRKSLGFVTAELVKNAVEGIGQKPFTLLA
LFREHNEEFRKRVGVDRKEETYESYENSYNILASFVKKRKEKEDVALRSLDREFYDDFEI
FLRTDREMKPKTVHEHLYRLKKMTKRAVSQGTLRRDPYGKLHPELPRRKSRHLKLEDLKK
LMETPVDKPNLQRVRDWFLFATFTGLSYADLKRLSEKDITQSDDGTYWIHIRRQKTETPS
AIRLLNVPLQIIEKYRHERKSDRIFNLYCRGYLIKLTRELGRTYGFDMTFHKARHNFGTH
ITLSLGVPIETVSRMMGHKSISTTQIYAKVTDRKVDEDMKRLKEQTKGRKINLYEEDEPE
TADIITVNG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgaataataaagagataaaacgtcgcagcacgttctccctgctgttctacatc
aaccgcacgaaagtccgcaaggacggaacatgtaaattgttatgcaaggtaagcatcgat
gccaagtcggccccgatcaatatcaacgcgtttgtcgagccatcgctttggaatccggaa
accaaaagggcgaacggacgaagcgagaacgcccgaacggtaaacctggcaatagagaaa
ctgaccgaaaaaatcaccggacattaccgtcatattcgtaaaagcctcggtttcgtgacg
gccgagctggtcaaaaacgccgtggaaggaatcgggcagaaaccgttcaccctccttgcc
ttgttccgcgagcataacgaggagttccgcaagcgtgtcggcgtggatcgcaaggaagaa
acctatgaaagttacgagaactcctataatattttagcctccttcgtgaaaaaaaggaag
gaaaaggaggatgtagcgttgcggagccttgaccgggagttctacgatgattttgaaata
ttcctgcgtacagatcgtgaaatgaaacccaagacagtacacgagcatctttaccggttg
aagaaaatgaccaagcgggctgtcagtcagggtacactccggcgcgacccttacgggaag
ctgcacccggaactgccccggcgcaagagccgccatttgaaactcgaagacctcaaaaag
ctgatggaaactcccgtcgataaacccaacctccagcgggtgcgggactggtttctcttc
gctaccttcacggggttgtcctacgccgacctgaaacgcttgtccgaaaaagacatcacg
cagtcggacgacggaacgtactggatacacatccggcgccagaagaccgaaacgccctcg
gccatccgcctgctgaacgtgccgttgcagatcatcgagaaataccgccacgagcgtaaa
agcgacaggattttcaatctctattgccgggggtatctcatcaagctcaccagagaactg
ggacggacatacggcttcgacatgacctttcacaaggcgaggcacaatttcgggacacat
atcacgctctcgttgggtgtgcctatcgaaactgtcagccgcatgatgggacacaagagc
atttccaccacgcagatttacgccaaagtgaccgaccgcaaggtggacgaggacatgaaa
cggctgaaagaacagaccaaaggccggaaaataaatctctacgaggaggacgaaccggaa
acggcagatattataacggtaaacggttga
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