Candidatus Arthromitus sp. SFB-mouse-Yit: MOUSESFB_0287
Help
Entry
MOUSESFB_0287 CDS
T01857
Symbol
rluC
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
asm
Candidatus Arthromitus sp. SFB-mouse-Yit
Brite
KEGG Orthology (KO) [BR:
asm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asm03009
]
MOUSESFB_0287 (rluC)
Enzymes [BR:
asm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
MOUSESFB_0287 (rluC)
Ribosome biogenesis [BR:
asm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MOUSESFB_0287 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
HTH_Tnp_2
Motif
Other DBs
NCBI-ProteinID:
BAK79429
LinkDB
All DBs
Position
345339..346328
Genome browser
AA seq
329 aa
AA seq
DB search
MKQEIRIGGNEKNQRLDKFLRKLFKNVELNLIFRDIRKGNIRVNGKKQKINYKIQENDIL
RIFGYYYKLGNDSQGIDTEEYVEYNKPKICYEDSNILVVVKNIDTLVHSDGNRDTKDLSK
DVRMYLSKKKDINLNNNLIFNPSPVNRLDRNTYGLVIFGKNNLATRELCELIKDRIISKY
YRVLVEGKIKDGIYTAYIKKDSKLNKSIVYKYKIPESKEIQMEVRVIDTNGVVSLLEINL
ITGRSHQIRSHLQFLNNPIVGDIKYGNKGLKNYFFNKYGVQNQLLFAYKLSFNGIDENMS
INYLNSKVIVAPLPSQFKRIIKQEFKITI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggagattagaattggtggtaatgagaagaaccaaagattagataagttttta
aggaaattatttaaaaatgttgaattaaatttaatattcagggatataagaaaggggaat
atacgagttaacggtaagaaacaaaagataaattataagatacaagaaaatgatattttg
agaatatttggatattattataagttaggtaatgatagtcaaggtatagatactgaagaa
tatgtagaatataataaaccaaagatatgttatgaagattcaaatatattggttgtagtg
aagaatattgatactctagttcattcagatggtaaccgtgatacaaaagatttaagtaaa
gatgttaggatgtatttgtctaagaaaaaagatattaatttaaataataatttgattttt
aatccatcacctgtaaacagattggatagaaatacttatggattagttatatttggaaaa
aataatttagctacaagagagttatgtgaacttattaaggatagaataatctctaagtat
tatagagttcttgttgaaggtaaaataaaagatgggatttatactgcatacataaaaaag
gatagtaaattgaataaatcaatagtatataagtataaaataccggaatccaaggaaata
caaatggaagttagggttattgatacaaatggtgtagttagtttgttagagataaattta
ataactggaagaagtcaccagataagaagccaccttcaatttttaaataatccaatagtt
ggagatataaaatatggcaataaaggattaaagaactattttttcaacaaatatggagta
caaaatcagttgttatttgcatataaattgtcctttaatggaatagatgaaaatatgagc
ataaattatttaaatagtaaggtgatagtggcaccgctgccgtcacaatttaaaaggatt
ataaaacaggaatttaaaattacaatttag
DBGET
integrated database retrieval system
