Candidatus Arthromitus sp. SFB-mouse-Yit: MOUSESFB_1059
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Entry
MOUSESFB_1059 CDS
T01857
Symbol
sbcD
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
asm
Candidatus Arthromitus sp. SFB-mouse-Yit
Brite
KEGG Orthology (KO) [BR:
asm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asm03400
]
MOUSESFB_1059 (sbcD)
DNA repair and recombination proteins [BR:
asm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MOUSESFB_1059 (sbcD)
Archaeal homologous recombinant proteins
MOUSESFB_1059 (sbcD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
CTP_transf_like
SBP56
BAHCC1-like_Tudor
Motif
Other DBs
NCBI-ProteinID:
BAK80201
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Position
complement(1198118..1199278)
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AA seq
386 aa
AA seq
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MKILHTSDWHIGKKVNDFNMLDDQRYVLDQICNIIKREKIDVVIIAGDLYDKAIVDTHAI
KLLNDVLVKIVNECGAKVILIAGNHDSADRISFVKEFLVNSGIYIEGKFEGKVSKISLKD
VFGDVNFYPISYFDEVHIKHLFNDSSIKTSNDALIRIIEGMDVDYSKRNIFIAHGYFSNK
DGDKMIESDSERRLSIGGQDVMDASILKNFDYVALGHLHANQKVILDHIRYSGSIVKYSF
SEMNHKKSVTIVDLGDKGDVRINQVELRLKHDMREIEGYIDTITSEEFYKNYNLDDYFRI
ILHDSIGVRDPATRIRKIYKNFMEIKFRDSSFGDGNDEEISNSDIILKSPFELFEMFYKS
MTDKELNHVQRDILKDVIKKVNILDE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattacatacttcagattggcatattgggaaaaaggtcaatgattttaatatg
cttgatgaccaaagatatgttttagatcaaatttgtaacattataaagagagaaaaaatt
gatgttgtaattattgcaggagatttgtatgataaagccattgtggatacacatgctatt
aaacttttaaatgatgtattggttaaaatagtgaatgaatgtggagctaaagtgattttg
atagcgggaaatcatgatagtgcagatagaatatcttttgttaaggaatttttagttaat
tcaggaatttatatagaaggaaaatttgagggtaaggttagcaaaatatctttaaaggat
gtgtttggagatgttaacttttatcctatttcatattttgatgaggttcatataaagcac
ttatttaatgattcttcaattaagacatctaatgatgctttaattaggataatagaaggt
atggatgttgattacagcaagaggaatatatttatagctcatggatatttttctaataaa
gatggagataagatgattgaaagtgattccgaaagaagattatcgataggtggacaagat
gttatggatgcatctatacttaaaaattttgattatgtagcacttggacatcttcatgca
aatcaaaaagttattttggatcatataaggtattcaggttctatagtgaagtattcattt
tcagagatgaatcataaaaagagtgtaacaattgttgacttgggagataaaggtgatgtt
agaataaatcaagttgaacttagacttaaacatgacatgagagaaatagaaggatatatt
gatactataacgagtgaagaattttataagaattataatcttgatgattactttagaata
attcttcatgattctattggggttagagatcccgcaactagaattagaaagatttataaa
aattttatggagattaaatttagagatagtagttttggtgatgggaatgatgaggagata
agtaattcagatattatattaaaatctccttttgaattattcgaaatgttttataagagc
atgacagataaggaactcaatcatgttcaaagagatattttgaaagatgttataaagaaa
gtaaatatcttagatgaataa
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